FC875500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.462e-63 Identity = 117/187 (62.57%), Postives = 145/187 (77.54%), Query Frame = 2 Query: 107 MTSASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 M S++PPVLPISN TPAFR IN I+++++ G ++RRPWAELADRSA SKPES S+A +RIRKNYSYF+VNYLTV ++ FSL+T+PFSL+ L+ LLASW+FLYLFRP+DQP+V+FGRTFS+RETLG LI+ SIFV FLT VGS+L+SA+M+G LICAHGAFR PE Sbjct: 1 MASSAPPVLPISNPQTVPSAAPSSVESQPPIA-TPAFRNFINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPE 186
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56 Identity = 106/184 (57.61%), Postives = 138/184 (75.00%), Query Frame = 2 Query: 116 ASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 A+PP LPIS+ TPAFR ++ +S S+R +QRRPW EL DRSA S+PES ++A RIR+N YF+VNY+T+V++V+A SL+++PFSLL+L+ L +WIFLYLFRPSDQPLVV GRTFS+RETLGVL++L+I V FLTSVGS+L SA+M+G G++C HGAFRVPE Sbjct: 3 ANPPTLPISDHSGGGSQSQQPVS-------TPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPE 179
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.143e-53 Identity = 99/184 (53.80%), Postives = 134/184 (72.83%), Query Frame = 2 Query: 116 ASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 A+PP LP++N TPAFR + +S S+R G +QRRPW EL DRS+ ++PES ++A RIRKN +YF+VNY+ +V++V+AFSL ++P SLL+L+GLL W+FLYLFRPSDQPLVVFGRTFS+RETL L++ +I V F+TSVGS+L SA+M+G ++C HGAF VP+ Sbjct: 2 ATPPTLPVTNQQAVQSQPPIN---------TPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPD 176
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.724e-51 Identity = 100/187 (53.48%), Postives = 133/187 (71.12%), Query Frame = 2 Query: 107 MTSASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 M S +PPVLPIS P RA +N +++++ G ++ RPW+EL DRSAF+KP+S SEA R RKN SYFRVNY+ +VA+++ FSL+ +PFSL++L+ L ASW+FLYLFRPSD+PL++FGR+FSE ETLG LI+ +I V F TSVGS+LISA+M+G IC HGAFR P+ Sbjct: 1 MVSTNPPVLPISTTATDTTNQPPIVTAVVESQP-PVVRAFVNGVTETVCGGLSRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPD 186
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.595e-49 Identity = 94/185 (50.81%), Postives = 135/185 (72.97%), Query Frame = 2 Query: 113 SASPPVLPISNXXXXXXXXXXXXXXXXXXXXTPAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 S+SP +LP++N + AFR ++ +S SLR +QRRPW EL DRS+F++P+S +++ RIRKN +YF+VNY +V++V+AFSL+++PFSLL+L+ LL SW+FLYLFR SDQPLV+FGR+FS+RETL L++ +I V F+TSVGS+L SA+ +G ++C HGAFRVP+ Sbjct: 2 SSSPAILPVTNQQAATQSQPPIN--------SHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPD 178
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46 Identity = 86/152 (56.58%), Postives = 118/152 (77.63%), Query Frame = 2 Query: 212 AFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 + R L++ + ++R+ A RPWAEL DRSAFS+P S SEAT R+RKN+SYFR NY+T+VA+++A SL+T+PF+L +L L ASW+FLY FRP+DQPLV+ GRTFS+ ETLG+L + ++ V F+TSVGS+L+S + VG + HGAFR PE Sbjct: 25 SLRVLLSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPE 176
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 2 Query: 209 PAFRALINHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 P + I+ R G A RRPW ++ D +F+ P + RIR N YF+ NY VV + SLI NPFSLL+L+ LL +W+FLY R D+PL VF R R L ++ V+++ + FLT + A++ GA + +H A R E Sbjct: 16 PKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTE 166
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 227 INHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFR 658 I+ ++ G A RRPW + D + + P F +A RI+ N YFR NY V ++ SL+ +P SL++L L+ WIFLY R D+PLVVFG +R L L VL++ + LT S ++ +++ A L+ H A R Sbjct: 22 ISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVR 163
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 248 LRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPE 667 ++ G A RR W + D + P S+A RI+ N +YFR+NY VV +VI FSLI +P SL++ L+ WIFLY R D+P+ +F +R L VL VL++ + LT+ ++ A++ GA L+ H R E Sbjct: 29 IKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTE 166
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 42/129 (32.56%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 272 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFR 658 RPW E+ D SA S P + EA ++ N SYFR NY V ++ LI +P S++ + + WI LY R ++ +V+ G+ ++ L +L ++++ T VG ++ ++++G ++ AHGAFR Sbjct: 48 RPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFR 176 The following BLAST results are available for this feature:
BLAST of FC875500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875500 ID=FC875500; Name=FC875500; organism=Citrus clementina; type=EST; length=709bpback to top |