FC875665
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875665 vs. ExPASy Swiss-Prot
Match: FBK30_ARATH (F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana GN=At1g80440 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60 Identity = 114/194 (58.76%), Postives = 145/194 (74.74%), Query Frame = 3 Query: 81 MDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 662 M+LIP+LP+++A ECL R SY+QF I+SVC+ W E+S +F RK +R S++LL ++QARVD + G K ATP YRI+VLE GSG W+ELPPIPG GLPLFC+L +VG +L+V+GGLD TW+A SVFVF+ +++ WR GA MPG RR FGCASD DRTV VAGGH+E+K AL SAM YDV+ D Sbjct: 1 MELIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQARVDPA---GSGKIIATPEYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLGGLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCALTSAMVYDVSED 191
BLAST of FC875665 vs. ExPASy Swiss-Prot
Match: FBK46_ARATH (F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana GN=At2g44130 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 80/226 (35.40%), Postives = 115/226 (50.88%), Query Frame = 3 Query: 54 TKKK--KFDSVMDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQ---------ARVDQ--------SRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFP--DGLPLFCQLSAV--GPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 662 +KKK F +LIP LP+E+ALECL RV ++ + + SVC+ W+S +S F + R+ +E LL + Q VD+ S P+ F TP + ++V W + FP + +PLFC+ + ++++IGG D T + + V+V WRRGA M R F CAS VYVAGGHD+ KNAL+SA YDV +D Sbjct: 6 SKKKGGDFQQCHELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQPLTPPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYNAAMSTWHRV----AFPEEEQIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWRRGAPMKES-RSFFACASVSPTKVYVAGGHDDQKNALRSAEVYDVEKD 226
BLAST of FC875665 vs. ExPASy Swiss-Prot
Match: SKI20_ARATH (F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana GN=SKIP20 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26 Identity = 81/237 (34.18%), Postives = 114/237 (48.10%), Query Frame = 3 Query: 51 GTKKKKFDSVM-DLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQ-------------ARVDQSRKSG------------VPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLATWEASSSVFVFNIISA-----TWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 662 G KKK + DLIP LP E+A+ECL RV ++ ++I SVC+ WK IS F + R +E LL + Q + Q +K P+ TP+Y ++V W + P+ +PLFC+ A+ ++++IGG D T + VFV + + +RRG M R F CAS G VYVAGGHD+ KNAL+SA YDV +D Sbjct: 2 GVSKKKSGEIRGDLIPGLPEELAIECLVRVPFQFHSSIKSVCRSWKCVISSRSFIKERIGFGKAESLLCLVQPLTSPPSPAMMEGGEMSQKKKEEEEGESQMTQQLLQPRITGTPLYGLSVYNATLDTWHRV----AIPERIPLFCECVAIQDAGKVLLIGGWDPETLQPVRDVFVLDFFAGEGSGRRFRRGRPM-SAARSFFACASVGSTKVYVAGGHDDQKNALRSAEVYDVEKD 233
BLAST of FC875665 vs. ExPASy Swiss-Prot
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 3 Query: 87 LIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDL--ATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYD 650 LIP LP+++A +CL+ V +F ++ SVCK W+ + EF R+ E+ L++ G R+ V++ + S LPP+PG ++ V +L+VI G + + AS+ V+ ++ +W R AD+ R F CA + + VYV GGH D +L SA YD Sbjct: 39 LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTMNA-----GGKDNRW-------EVMDCLGQKLSSLPPMPG---PAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVA-RYDFACA-EVNGHVYVVGGHGVDGESLSSAEVYD 211 The following BLAST results are available for this feature:
BLAST of FC875665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875665 ID=FC875665; Name=FC875665; organism=Citrus clementina; type=EST; length=662bpback to top |