FC876292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 405 SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 653 ++ V+ EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T IRG KAKVNFP+E Sbjct: 104 AYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 53/88 (60.23%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 441 AKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPRAQ*KATLRNP 704 A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ IRGKKAKVNFP+ A R T + P Sbjct: 108 AAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAP 195
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22 Identity = 52/89 (58.43%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 441 AKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDET-PAAAPRAQ*KATLRNP 704 A+KS RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T IRG KAKVNFP+E A + + KA L+ P Sbjct: 113 AEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKP 201
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 48/77 (62.34%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 420 AVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 AVK + + RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT IRG KAK+NFPD Sbjct: 60 AVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPD 136
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 3 Query: 444 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 ++ +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T IRG+KAK+NFP+ Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 456 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDET 656 ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT IRG KAK+NFP+E+ Sbjct: 18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNES 84
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 459 RKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 671 R++K +YRG+RQRPWGKWAAEIRDP + RVWLGTF+T RG KAK+NFP++ P Sbjct: 71 REKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPP 141
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 43/89 (48.31%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 384 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 647 T S+ R+ S K E K +RK +KN YRG+RQRPWGK+AAEIRDP + RVWLGTF T RG +AK+NFP Sbjct: 104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 43/80 (53.75%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 411 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 650 GS K E + S ER +K YRG+RQRPWGKWAAEIRDP K RVWLGTF T RG KAK+NFP+ Sbjct: 42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118
BLAST of FC876292 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 37/68 (54.41%), Postives = 42/68 (61.76%), Query Frame = 3 Query: 465 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAA 668 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ A+ Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLAS 155 The following BLAST results are available for this feature:
BLAST of FC876292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876292 ID=FC876292; Name=FC876292; organism=Citrus clementina; type=EST; length=709bpback to top |