FC876341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.401e-36 Identity = 89/181 (49.17%), Postives = 121/181 (66.85%), Query Frame = 3 Query: 138 MSVTLLWVVSPNSQLS-NCFGFVDSVREENRLFYSSRFLYQHQTRTAVFNSRPKQFNNSNKQRRNSYPLDTDLRHPC--SSGIDLPEISCMVASTAGEVAMSSEEMVYNVVLKQAALVNKQPSGVTRDLDVNPDIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 MS+ VVS N +LS + FGF+DSVR+ ++ S RF +++ + + KQ+ ++ T+L++P SG ++ MVA+ AGE+A+S+E+ VYNVV+KQAALV +Q +LDV PDI LPGTLSLL+EAYDRCGE CAEYAKTFYL T+LMT ER++AIW IY Sbjct: 1 MSLASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLI----------NKKQKWGNHSHSTELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLR-TAGELDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIY 170
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY_CAPAN (Phytoene synthase, chloroplastic OS=Capsicum annuum GN=PSY1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.830e-36 Identity = 95/178 (53.37%), Postives = 110/178 (61.80%), Query Frame = 3 Query: 138 MSVTLLWVVSPNSQLSNCFGFVDSVREENRLFYSSRFLYQHQTRTAVFNSRPKQFNNSNKQRRNSYPLDTDLRHPCSSGIDLPEISCMVASTAGEVAMSSEEMVYNVVLKQAALVNKQPSGVTRDLDVNPDIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 MSV LLWVVSP +SN GF+ SVRE NR+F SS R N R K+ + SY SG S +VA+ AGE+ MSSE MVY+VVL+QAALV +Q T +LDV DI +PGTL LLSEAYDRC E CAEYAKTFYL T+LMT ERR+AIW IY Sbjct: 1 MSVALLWVVSP-CDVSNGTGFLVSVREGNRIFDSSG------RRNLACNERIKRGGGKQRWSFGSYLGGAQT----GSGRKFSVRSAIVATPAGEMTMSSERMVYDVVLRQAALVKRQLRS-TDELDVKKDIPIPGTLGLLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIY 166
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY1_SOLLC (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.689e-35 Identity = 92/178 (51.69%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 138 MSVTLLWVVSPNSQLSNCFGFVDSVREENRLFYSSRFLYQHQTRTAVFNSRPKQFNNSNKQRRNSYPLDTDLRHPCSSGIDLPEISCMVASTAGEVAMSSEEMVYNVVLKQAALVNKQPSGVTRDLDVNPDIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 MSV LLWVVSP +SN F++SVRE NR F SSR R V N R + KQ N G S ++A+ +GE M+SE+MVY+VVL+QAALV +Q T +L+V PDI +PG L LLSEAYDRCGE CAEYAKTF L T+LMT ERRRAIW IY Sbjct: 1 MSVALLWVVSP-CDVSNGTSFMESVREGNRFFDSSRH------RNLVSNERINR--GGGKQTNN--------------GRKFSVRSAILATPSGERTMTSEQMVYDVVLRQAALVKRQLRS-TNELEVKPDIPIPGNLGLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIY 154
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.039e-31 Identity = 91/185 (49.19%), Postives = 109/185 (58.92%), Query Frame = 3 Query: 135 SMSVTLLWVVSPN---SQLSNCFGFVDSVREENRLFYSSRFLYQHQTRTAVFNSRPKQFNNSNKQRRNSYPL-DTDLRHPCSSGIDLPEISCMVASTAGEVAMSSEEMVYNVVLKQAALVNKQPSGVTRDLDVNP--DIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 S SV +LWV + + ++NC G V V E +RLF P Q NK ++ P + S I + S +VAS +GE+A+SSEE VYNVVLKQAALVNKQ + DLDV D+ LPG+LSLL EAYDRCGE CAEYAKTFYL TLLMT ERR+AIW IY Sbjct: 2 SSSVAVLWVATSSLNPDPMNNC-GLV-RVLESSRLF------------------SPCQNQRLNKGKKKQIPTWSSSFVRNRSRRIGVVS-SSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIY 165
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30 Identity = 76/136 (55.88%), Postives = 89/136 (65.44%), Query Frame = 3 Query: 285 SRPKQFNNSNKQRRNS-YPLDTDLRHPC------SSGIDLPEISCMVASTAGEVAMSSEEMVYNVVLKQAALVNKQPSGVTRDLDVNPDIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 S PK N K+ R S Y L T ++ C ++G L S +VA+ AGE +SSE+ VY+VVLKQAALV Q + DV PDI LPGT+ LL +AYDRCGE CAEYAKTFYL TLLMT ERRRAIW IY Sbjct: 28 SSPKYDNLGRKKSRLSVYSLYTTSKYACVGFEAENNGKFLIR-SSLVANPAGEATISSEQKVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTVYLLKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIY 162
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY_MAIZE (Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 3 Query: 357 HPCSSGIDLPEI-SCMVASTAGEVAMSSEEMVYNVVLKQAALVNKQPSGVTRDLDVNP-DIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 HP +G P + S + + AGE +SSE+ VY+VVLKQAAL+ +Q T LD P D+ +P + L EAYDRCGE C EYAKTFYL T+LMT ERRRAIW IY Sbjct: 50 HPWEAGRPSPAVYSSLPVNPAGEAVVSSEQKVYDVVLKQAALLKRQLR--TPVLDARPQDMDMPR--NGLKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIY 152
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18 Identity = 54/108 (50.00%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 387 EISCMVASTAGEVAMSSEEMVYNVVLKQAALVN-------------KQPSGVTRDLDVNPDIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 ++S V++ A +SEE VY VVLKQAALV K+ + D N D + + +LL+EAYDRCGE CAEYAKTFYL TLLMT ERRRA+W IY Sbjct: 38 KLSTGVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTGSKSFDKSENDDAGMK-SWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIY 144
BLAST of FC876341 vs. ExPASy Swiss-Prot
Match: PSY2_SOLLC (Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum lycopersicum GN=PSY2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17 Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 522 NPDIALPGTLSLLSEAYDRCGEACAEYAKTFYLRTLLMTSERRRAIWPIY 671 +PDI LPG L LLSEAYDRCGE CAEYAKTFYL T+LMT +RRRAIW IY Sbjct: 1 DPDIVLPGNLGLLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIY 50 The following BLAST results are available for this feature:
BLAST of FC876341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876341 ID=FC876341; Name=FC876341; organism=Citrus clementina; type=EST; length=672bpback to top |