FC876343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.303e-23 Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 3 Query: 30 SKTIS*KMASHLGICTPCASEIITGFPSYRSPPLLRNRDFCGRIKAVADNRGSLDHLQRSSLN------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 S +S K S + PC + FP R P L R+ + DN+ + + R + + + +P++ + +S G+ D + R+++QM++TM+RI ED +T P + G R PW I++ E++ ++R D+PG+S+ DVKV VE+ +LVIK++ + N E+ W Y Y TR+ LPDN E EK++ Sbjct: 12 SPILSQKPGSSVKSTPPC----MASFPLRRQLPRLGLRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFED----AITIPGRN----IGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGG---------EDCWSRKSYSCYDTRLKLPDNCEKEKVK 205 HSP 2 Score: 28.4906 bits (62), Expect = 5.303e-23 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+KDGVLYITIP Sbjct: 206 AELKDGVLYITIP 218
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.169e-22 Identity = 66/205 (32.20%), Postives = 104/205 (50.73%), Query Frame = 3 Query: 69 ICTPCASEIITGFPSYRSPPLLRNRDFCGRIKAVADNRGSLDHLQR--------SSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWP-SQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 +C+P A S + R RI+A S+D +Q+ SS+ + ++ VS G+ D RT++QM++TM+R+ ED T P S + R SG R PW I+E E++ K+R D+PG+S+ DVK+ VE+++LVIK E+ + + ++ W SY TR+ LPDN E +KI+ Sbjct: 12 LCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFED------TMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE----------DSDDSWSGRSVSSYGTRLQLPDNCEKDKIK 200 HSP 2 Score: 25.0238 bits (53), Expect = 1.169e-22 Identity = 10/13 (76.92%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+K+GVL+ITIP Sbjct: 201 AELKNGVLFITIP 213
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.977e-22 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 3 Query: 162 KAVADNRGSLDHLQRSSLN---------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 +A DN+ + + SS + +P + A VS G+ D RT++QM++TM+R+ ED +T+P + SG RTPW I + EN+ K+R D+PG+S+ DVKV VE MLVIK E + + ++ W N Y SY TR++LPDNV +KI+ Sbjct: 49 RATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDT----MTFPGRNRA--SGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDG-------RDKHSWGRN-YSSYDTRLSLPDNVVKDKIK 208 HSP 2 Score: 23.483 bits (49), Expect = 1.977e-22 Identity = 9/13 (69.23%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+K+GVL+I+IP Sbjct: 209 AELKNGVLFISIP 221
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.345e-22 Identity = 63/173 (36.42%), Postives = 101/173 (58.38%), Query Frame = 3 Query: 138 NRDFCGRIKAVADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 N+D + +N+G + + S + +P++ A VS G+ D RT++QMM+TM+R+ ED +T+P + R G R PW I++ EN+ K+R D+PG+S+ +VKV VE+ +LVIK E ++ E+ D S W N Y SY TR++LPDNV+ +K++ Sbjct: 61 NKDTSVDVHVSNNNQGGNN---QGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDT----MTFPGSRNR---GTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEH-KKEESGKDDS-------WGRN-YSSYDTRLSLPDNVDKDKVK 214 HSP 2 Score: 21.9422 bits (45), Expect = 3.345e-22 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+K+GVL I+IP Sbjct: 215 AELKNGVLLISIP 227
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.435e-22 Identity = 55/164 (33.54%), Postives = 90/164 (54.88%), Query Frame = 3 Query: 174 DNRGSLDHLQRSSLN---QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 DN + H+ + + +P++ A +S GI D + R+++Q+++TM+R+ ED +T+P + G R PW I++ E++ ++R D+PG+++ DVKV VE+ MLVIK E D S W S Y SY TR+ LPDN E +K++ Sbjct: 6 DNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDT----MTFPGRN----IGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-------WSSRTYSSYDTRLKLPDNCEKDKVK 154 HSP 2 Score: 26.5646 bits (57), Expect = 7.435e-22 Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+K+GVLYITIP Sbjct: 155 AELKNGVLYITIP 167
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 171 ADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAE-KAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 A N G+ Q+ + Q +P++ +S G+ D RT++QM++TM+R+ +D V +P++ R + R R PW I E E + K+R D+PG+SR +V+V VE+ LVI+ E K + E +G + W SY R+ALPD + +++ Sbjct: 63 AQNAGN----QQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDD----AVGFPTR--RSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGG----DGWWKERSVSSYDMRLALPDECDKSQVR 211
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.313e-16 Identity = 49/155 (31.61%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 201 QRSSLNQSQPKKRAA--PVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQER-VRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 656 Q+ + Q +P++ +A +S G+ D RT++QM++TM+RI +D + +P+ R + +G R PW + E + + ++R D+PG+SR +VKV VE+ LVI+ E + +GS + W SY R+ALPD + K++ Sbjct: 67 QQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDD---VALGFPATPRRSLATG--EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGS---GDGWWKERSVSSYDMRLALPDECDKSKVR 213 HSP 2 Score: 22.7126 bits (47), Expect = 6.313e-16 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+K+GVL +T+P Sbjct: 214 AELKNGVLLVTVP 226
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.589e-12 Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 231 KKRAAPVSSPG---------IWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV 638 + AP+S G ++D F A R+V Q+M M+++ME+PF R R R W +RE E ++++D+PG+++ DVKV VE++ L+IK+E + E EEE+ YS+RI L N+ Sbjct: 47 RSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPF---------MAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETE--------EEEQR------RRYSSRIELTPNL 168 HSP 2 Score: 22.3274 bits (46), Expect = 3.589e-12 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 656 AEVKDGVLYITIP 694 AE+K+GVL +T+P Sbjct: 176 AEMKNGVLKVTVP 188
BLAST of FC876343 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 219 QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV 638 +S P++R S ++D F R+V Q++ M++ ME+P + + SG RRG W I+E ++ +R+D+PG+SR DVK+ +E+ LVI+ E G E+ E +G +++RI LPD + Sbjct: 55 RSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL-----SATRGMGASGARRG---WDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGE----------GKNEEDGGEEGESGNRRFTSRIGLPDKI 174 The following BLAST results are available for this feature:
BLAST of FC876343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876343 ID=FC876343; Name=FC876343; organism=Citrus clementina; type=EST; length=694bpback to top |