FC876344

Overview
NameFC876344
Unique NameFC876344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10334 contig Ccv1_Contig10334:1..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.840e-29
Identity = 63/137 (45.99%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARC--GLETDMSDLI 593
            IIG+LH       PH+S   LA +LGP+  + LG +P ++VS+ E+A+++LKTHD +FASRPS  + + +     DV FSP G YWRQ RKICV ELLS KRVNS++ + ++EV   M R+   C  G   ++S+L+
Sbjct:   40 IIGNLHQL--GNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELL 174          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.241e-26
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVK 554
            PH+    LAEK GP+ ++QLG V AVVV+S E+AKQVLKTHD  FASRP +L+   +     D+ FSP G YWRQ RKIC+ E+LS K V SF  +  DEV R +  ++
Sbjct:   52 PHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQ 160          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.234e-25
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 3
Query:  192 IGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKA 557
            IG +H     R PH+    LA+K GP+ ++QLG V AVVV+S ++AK+VLKTHD  FASRP +L+   +     D+ FSP G YW+Q RKICVTE+LS K V SF  +  DEV R +  +++
Sbjct:   41 IGSMHHLAGGR-PHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQS 161          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.105e-25
Identity = 56/141 (39.72%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTD 611
            +IG+LH       PH+S   L+ + GP+  + LGRVP +VVSS ++A+ +LKTHD+VFASRP     + +     DV F+P G YWRQ + +CV  LLS K V SF+ V  +E++  M +++    L+ ++S+L+ +   D
Sbjct:   41 LIGNLHQL--GHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVNVSELLGSLTND 179          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.749e-25
Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLI 593
            PH+    LA+K GP+ ++QLG V  ++VSS E AK+V+KTHD  FASRP  L T  V  G  D+ FSP G YWRQ RKIC  ELLS KRV S   + ++EV   + R+ +  G   ++S  I
Sbjct:   40 PHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAI 161          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.689e-25
Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 3
Query:  189 IIGHLH-LFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFA 599
            IIG+LH L      P ++  KL  K GP+ ++QLG +  +VVSS ++A +++KTHD  F  RP +L+ + +  G  D+ F+P G YWRQ RKIC  ELLS KRV SF  +  DE  + +  + +  G   D+S  +F+
Sbjct:   42 IIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKLFS 179          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.998e-25
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTD 611
            +IG+LH     R PH+S   L+ + GP+  +  GRVP +VVSS ELA+ VLKTHD+VFASRP     + +     DV  +P G YWRQ + +CV  L S K V SF+ V ++E++  M +++    L  ++S ++ +   D
Sbjct:   40 LIGNLHQL--GRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLTND 178          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.970e-23
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 3
Query:  189 IIGHLHLFYKERKP-HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRV 551
            IIG+ H   + R P H++   LAEK GPI +++ G VP VVVSS E AK  LKTHD +FASRP     K+      D+ FSP G +WR+ RKICV ELL+ KR+ SFK V  +E++  +  +
Sbjct:   51 IIGNFH---QVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSI 169          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.970e-23
Identity = 52/141 (36.88%), Postives = 86/141 (60.99%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTD 611
            +IG+LH     R PH+S   L+ + GP+  ++ G VP +VVSS ++A+ +LKT+D+VFASRP     + +     DV  +P G YWRQ + +CV  LL+ K V SF+ V  +E++  M +++    L+ ++S+L+ +   D
Sbjct:   41 LIGNLHQL--GRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVNLSELLGSLTND 179          
BLAST of FC876344 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.360e-23
Identity = 52/141 (36.88%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSTKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDDEVNRFMSRVKARCGLETDMSDLIFAFCTD 611
            +IG+LH     R  H+S   L+ + GP+  + LGRVP ++VSS ++A+++LKTHDQ FA+RP    ++ +     DV  +P G YWRQ + +CV  LLS K V SF+ V ++E+   M++++    L  ++S ++     D
Sbjct:   39 LIGNLHQL--GRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTND 177          
The following BLAST results are available for this feature:
BLAST of FC876344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71A1_PERAE1.840e-2945.99Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71D7_SOLCH4.241e-2652.29Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71D6_SOLCH1.234e-2548.36Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71AL_ARATH2.105e-2539.72Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA2.749e-2547.54Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D8_SOYBN4.689e-2540.58Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71AQ_ARATH7.998e-2539.72Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PINTA1.970e-2347.54Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71AM_ARATH1.970e-2336.88Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH3.360e-2336.88Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003F09EF DevOvary1 Citrus clementina cDNA clone C32003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876344 ID=FC876344; Name=FC876344; organism=Citrus clementina; type=EST; length=618bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCACCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGATGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTT
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