FC876386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 142.51 bits (358), Expect = 6.205e-34 Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKFEHPRHGSLGFLPRKRA+R VKAFPKDDP+K CRLT+FLGYKAGMTHIVRDV KP S LHKK+TCEAVTIIETP Sbjct: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 134.806 bits (338), Expect = 1.294e-31 Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETPS 248 SHRKFEHPRHGSLGFLPRKRA R VKAFPKDD +K C+ TAF+GYKAGMTHIVR+V KP S LHKK+TCEAVTIIETP+ Sbjct: 2 SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPA 83
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.764e-31 Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKFEHPRHGSLGFLPRKR++R VK+FPKDD SK C LT+F+GYKAGMTHIVR+V KP S LHKK+TCEAVTIIETP Sbjct: 2 SHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.307e-27 Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SH KFE PRHGSLGFLPRKRA+R VKAFPKDD SK LTAFLGYKAGMTHIVRD+ +P S +HK++ EAVTIIETP Sbjct: 2 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTIIETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 5.625e-27 Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SH KFE PRHGSLGFLPRKRA+R VKAFPKDD SK LTAFLGYKAGMTHIVRD+ +P S +HK++ EAVT+IETP Sbjct: 2 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTVIETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGSLGFLPRKR++R VK+FPKDDPSK LTAFLGYKAGMTHIVR+V +P S ++KK+ EAVTI+ETP Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26 Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGSLGFLPRKR++R VK+FPKDDPSK LTAFLGYKAGMTHIVR+V +P S ++KK+ EAVTI+ETP Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 8.123e-26 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGSLGFLPRKR++R VK+FPKDDPSK LTAFLGYKAGMTHIVR+V +P S ++KK+ AVTI+ETP Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVVAVTIVETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.061e-25 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGSLGFLPRKR++R VK+FPKDD SK LTAFLGYKAGMTHIVR+V +P S ++KK+ EAVTI+ETP Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.061e-25 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGSLGFLPRKR++R VK+FPKDD SK LTAFLGYKAGMTHIVR+V +P S ++KK+ EAVTI+ETP Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETP 82 The following BLAST results are available for this feature:
BLAST of FC876386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876386 ID=FC876386; Name=FC876386; organism=Citrus clementina; type=EST; length=256bpback to top |