FC876438

Overview
NameFC876438
Unique NameFC876438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length576
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:11..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.108e-78
Identity = 117/124 (94.35%), Postives = 123/124 (99.19%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVRDTCRNIGF+SDDVGLDADNCKVLVYIEQQSPDIAQGVHGHL+K+PEEIGAGD G
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKQPEEIGAGDQG 124

HSP 2 Score: 49.6766 bits (117), Expect = 1.108e-78
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W+R
Sbjct:  141 SHVLATKLGARLTEVRKNGTCPWLR 165

HSP 3 Score: 38.1206 bits (87), Expect = 1.108e-78
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPEF+
Sbjct:  123 QGHMFGYATDETPEFM 138
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.197e-77
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFGEITTKA V+YEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124

HSP 2 Score: 50.0618 bits (118), Expect = 1.197e-77
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W+R
Sbjct:  141 SHVLATKLGARLTEVRKNGTCAWLR 165

HSP 3 Score: 35.8094 bits (81), Expect = 1.197e-77
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  123 QGHMFGYATDETPELM 138
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.560e-77
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFGEITTKA V+YEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124

HSP 2 Score: 49.6766 bits (117), Expect = 1.560e-77
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W+R
Sbjct:  141 SHVLATKLGARLTEVRKNGTCPWLR 165

HSP 3 Score: 35.8094 bits (81), Expect = 1.560e-77
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  123 QGHMFGYATDETPELM 138
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.447e-77
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFGEITTKA V+YEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124

HSP 2 Score: 48.521 bits (114), Expect = 3.447e-77
Identity = 20/25 (80.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W++
Sbjct:  141 SHVLATKLGARLTEVRKNGTCRWLK 165

HSP 3 Score: 35.8094 bits (81), Expect = 3.447e-77
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  123 QGHMFGYATDETPELM 138
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 3.447e-77
Identity = 116/124 (93.55%), Postives = 121/124 (97.58%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124

HSP 2 Score: 49.6766 bits (117), Expect = 3.447e-77
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W+R
Sbjct:  141 SHVLATKLGARLTEVRKNGTCPWLR 165

HSP 3 Score: 38.1206 bits (87), Expect = 3.447e-77
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPEF+
Sbjct:  123 QGHMFGYATDETPEFM 138
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 7.624e-77
Identity = 115/123 (93.50%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:   83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            ETFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE+IGAGD G
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDIGAGDQG 126

HSP 2 Score: 48.9062 bits (115), Expect = 7.624e-77
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA LTEVRKNGTC W+R
Sbjct:  143 SHVLATKLGASLTEVRKNGTCPWLR 167

HSP 3 Score: 38.1206 bits (87), Expect = 7.624e-77
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPEF+
Sbjct:  125 QGHMFGYATDETPEFM 140
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 9.924e-77
Identity = 116/124 (93.55%), Postives = 121/124 (97.58%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            METFLFTSESVNEGHPDKLCDQISDA+LDACL+QDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124

HSP 2 Score: 49.6766 bits (117), Expect = 9.924e-77
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W+R
Sbjct:  141 SHVLATKLGARLTEVRKNGTCPWLR 165

HSP 3 Score: 35.8094 bits (81), Expect = 9.924e-77
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  123 QGHMFGYATDETPELM 138
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.684e-76
Identity = 115/123 (93.50%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:   83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            ETFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVRDTCRNIGF+S+DVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 125

HSP 2 Score: 50.447 bits (119), Expect = 1.684e-76
Identity = 21/25 (84.00%), Postives = 25/25 (100.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC+W+R
Sbjct:  142 SHVLATKLGARLTEVRKNGTCSWLR 166

HSP 3 Score: 35.8094 bits (81), Expect = 1.684e-76
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  124 QGHMFGYATDETPELM 139
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.857e-76
Identity = 115/123 (93.50%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:   83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            ETFL+TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVR+TCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    4 ETFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 126

HSP 2 Score: 49.6766 bits (117), Expect = 2.857e-76
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            +HVLAT+LGAKLTEVRKNGTC W+R
Sbjct:  143 THVLATKLGAKLTEVRKNGTCPWLR 167

HSP 3 Score: 35.8094 bits (81), Expect = 2.857e-76
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  125 QGHMFGYATDETPELM 140
[Close]
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.721e-76
Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 2 
Query:   80 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
            M+TFLFTSESVNEGHPDKLCDQISDA+LDACL QD +SKVACETCTKTNLVMVFGEITTKANV+YEKI RDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGD G
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124

HSP 2 Score: 49.6766 bits (117), Expect = 3.721e-76
Identity = 21/25 (84.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:  502 SHVLATQLGAKLTEVRKNGTCTWMR 576
            SHVLAT+LGA+LTEVRKNGTC W+R
Sbjct:  141 SHVLATKLGARLTEVRKNGTCPWLR 165

HSP 3 Score: 35.8094 bits (81), Expect = 3.721e-76
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 
Query:  447 QGHMFGYATDETPEFI 494
            QGHMFGYATDETPE +
Sbjct:  123 QGHMFGYATDETPELM 138
The following BLAST results are available for this feature:
BLAST of FC876438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_PETHY1.108e-7894.35S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK1_SOLLC1.197e-7795.16S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK1_SOLTU1.560e-7795.16S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK_SOLBR3.447e-7795.16S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK1_CATRO3.447e-7793.55S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK2_PEA7.624e-7793.50S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK2_VITVI9.924e-7793.55S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK_PHALU1.684e-7693.50S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK_MEDFA2.857e-7693.50S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK_MESCR3.721e-7692.74S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]

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Properties
Property NameValue
Genbank descriptionC32004G08EF DevOvary1 Citrus clementina cDNA clone C32004G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876438 ID=FC876438; Name=FC876438; organism=Citrus clementina; type=EST; length=576bp
CCCCCCTCTATATTTCCTTTCTCGGGGGAGATTTCTCTCAATTCTAGATC
TAGCCGGTTCGCAGTTTTTGAAGTCCCCCATGGAGACTTTTTTGTTCACT
TCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTC
CGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGG
CTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATC
ACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCG
CAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTA
AGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTT
CATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATTCAGG
GGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATTGCCTCT
GAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGCA
AGAATGGCACTTGCACTTGGATGAGG
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