FC876467

Overview
NameFC876467
Unique NameFC876467
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length859
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig470 contig Ccv1_Contig470:438..1296. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.978e-74
Identity = 128/246 (52.03%), Postives = 181/246 (73.58%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMS 735
            T++ N+GT  ++I ARGS   FV  F+TFM+IGGFPSFVEDMKVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y + GLH G+ H+ +FVL L+A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ YR++F  ++KT E + P V+ +++
Sbjct:  418 TIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIYRIIFFIMIKTNEDVTPWVRGYIA 663          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 8.922e-59
Identity = 112/258 (43.41%), Postives = 174/258 (67.44%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 768
            T+F ++G    SI AR S   F+  F+TFM+IGGFPSF+E+MKVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y+L     G+ H+ +F L +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ YI++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  ++V YRL+F  ++K  E+  P +KA   +  KRT + ++
Sbjct:  396 TIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLEEMKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAILVCYRLLFFVVLKLRERAGPALKA---IQAKRTMRNLD 650          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.988e-58
Identity = 111/258 (43.02%), Postives = 175/258 (67.83%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 768
            T+F ++G    SI AR S   F+  F+TFM+IGGFPSF+E+MKVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y++     G  H+ +F L +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  ++V YR++F  ++K  E+ +P +KA   +  KRT + ++
Sbjct:  397 TIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKA---IQAKRTMKSLK 651          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.073e-51
Identity = 99/242 (40.91%), Postives = 152/242 (62.81%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVV 720
            ++F N+G ++ ++ +  +   F+A F+TFM+IGGF SF+E+MKVF RERLNGHYG   +   N  S+LP++ L+ L   +I   +     G  HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW+DLA++  +++ YR+ F  I+K  EK+ PV+
Sbjct:  391 SIFFNVGRNHTNVMSTAACGGFMAGFMTFMSIGGFQSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLAVVMMILIGYRIAFFAILKFREKVFPVI 632          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.698e-25
Identity = 62/209 (29.67%), Postives = 109/209 (52.15%), Query Frame = 1
Query:   67 LLMFVASFLTFMTI-GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD----NNLDGEQVLRDNWQLQMG-YSKWVDLAILFGMVVFYRLV 675
            L++++   L+  T+  G    +  + ++  E  N H GA  F+ G    ++P+L L+S+    + Y + GL   +    YFVL  F C+L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH Y+ +G+ +NE+ G  F      ++ G Q ++ N+Q+     +KW ++ +L  M   YRL+
Sbjct:  465 LILYMILTLSIGTLYSGLGHSLSSVAIYRSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRLL 673          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.076e-23
Identity = 73/246 (29.67%), Postives = 120/246 (48.78%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK------FDNN------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIVKTVEKMK 711
            T++ N+GT    I+ R  L  F  +FL   T    P F+++  +  RE  +G Y  ++ +  NT   LPYL LI++I    +Y L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  +   +     L  G+F     LP  +W + +Y+ + +KYA   +  NE+  L       F+        + G  VL  N   +    +W ++ +L G  V YR L FL ++K V   K
Sbjct:  335 TIYLNIGTGKEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLHER--QRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.711e-23
Identity = 61/234 (26.07%), Postives = 126/234 (53.85%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIV 690
            +V++ L  D   +  R  L  F  SFL   T+   P ++ + +V  +E   G Y  ++++  NT + +P+L ++SL+    VY + GL+   Q F++FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F     +P P W + +YY++ ++Y  + M  NE+  ++   F +      + GE VL++    +   ++W+++ I+    VFYR++  GI+
Sbjct:  386 SVYTRLKRDEEGVAERLGLFAFSLSFLLSSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 71/246 (28.86%), Postives = 117/246 (47.56%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------------NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIVKTVEKMK 711
            T++ N+G     I+ R  +  F  +FL   T    P F+ +  +  RE  +G Y  ++ +  NT   LPYL +IS+I    VY L GL   +Q F YFVL+++  +L+  S ++ ++SL PNY+TG      +     L  G+F     LP  +W + +Y+ + +KYA   +  NE+  L                 + G  VL+     +    +W ++ +L G  V YR L FL +++ V   K
Sbjct:  347 TIYINIGIGKAGIEKRFGMFAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEK--QRWFNVYVLLGFFVLYRVLCFLALLRRVSGSK 588          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.643e-21
Identity = 59/222 (26.58%), Postives = 114/222 (51.35%), Query Frame = 1
Query:   13 TVFSNLGTDNNSIQA-RGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLV 675
            +++ N+G      +  R     F+ +FL   T  G P F++D ++  RE     Y   ++V  +T   +P+L +IS++    VY L GL +    F YF L+++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ +  NE+ G  F      +Q L+++        KW +L I+   +V YR++
Sbjct:  368 SIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEYRGDVFLK----QQDLKES-------QKWSNLGIMASFIVGYRVL 576          
BLAST of FC876467 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 61/235 (25.96%), Postives = 121/235 (51.49%), Query Frame = 1
Query:   16 VFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLD---------GEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVK 693
            +F NL  D    + R  L  F+ +FL   TI   P F+++ ++  +E  +G Y  +++   N    LP+L +++++    VY L GL+  +  F +F LL++  +    S+++  ++LVPN++ G    +G+ G   L  G+F   +++P  +W + ++YI+  KY ++G   NEF   K +  L+          E +L++  +     S+W ++ I+   V+ YR +   I++
Sbjct:  408 IFHNLKDDLKGARERVGLFAFILTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIP-GYWIF-MHYISLFKYPFEGFLINEFS--KSNKCLEYGFGKCLVTEEDLLKE--ERYGEESRWRNVVIMLCFVLLYRFISYVILR 636          
The following BLAST results are available for this feature:
BLAST of FC876467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
AB11G_ARATH1.978e-7452.03ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH8.922e-5943.41ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH1.988e-5843.02ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH3.073e-5140.91ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH1.698e-2529.67ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB4G_ARATH2.076e-2329.67ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB23G_ARATH2.711e-2326.07ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB8G_ARATH7.889e-2328.86ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB10G_ARATH9.643e-2126.58ABC transporter G family member 10 OS=Arabidopsis ... [more]
AB5G_ARATH1.645e-2025.96ABC transporter G family member 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CB04RM1 EHR Citrus clementina cDNA clone KN0AAN2CB04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876467 ID=FC876467; Name=FC876467; organism=Citrus clementina; type=EST; length=859bp
GCACGAGGTGCCACTGTATTTAGCAATCTTGGGACTGACAATAATTCAAT
TCAGGCAAGAGGTTCGCTGCTCATGTTTGTAGCTTCATTTCTAACCTTCA
TGACCATTGGTGGATTCCCTTCTTTTGTTGAGGACATGAAGGTATTTGAG
CGAGAGAGACTAAACGGGCACTATGGTGCTACTGCGTTTGTGTTTGGCAA
CACGTTTTCTGCGCTGCCATACTTAGCTCTCATTTCATTGATTCCTGGAG
CGATAGTGTATGACCTTCCGGGACTTCACAAAGGATATCAACACTTCACA
TACTTTGTTTTGTTATTGTTTGCTTGCATGTTGCTCGTTGAGAGCCTAAT
GATGATCGTTGCAAGCTTGGTGCCCAACTATCTGACGGGCATAATAACAG
GAGCTGGAATTCAAGGCCTTATGATATTAGGCGGCGGATTTTTTCGATTG
CCAAATGATCTTCCTCATCCATTTTGGAAATACCCATTATATTATATTGC
TTTCCACAAATATGCGTATCAAGGAATGTTCAAGAACGAGTTTGAAGGTC
TGAAATTTGACAACAATCTAGATGGTGAGCAGGTTTTGAGAGATAATTGG
CAACTGCAAATGGGATATTCTAAGTGGGTTGATCTTGCTATCTTGTTTGG
TATGGTGGTTTTTTATCGACTTGTATTCTTGGGAATCGTCAAGACAGTTG
AAAAGATGAAGCCTGTGGTTAAAGCTTTTATGTCTGTGCCCATGAAACGA
ACAACTCAAATCATGGAAAATCCGTATACTACACCTCCACAAAAAGACAA
AATACTTTACAAGTGATCGTGAACAAAAGACTTCGGATATTCCTTAGTTC
AGCTAGTAA
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