FC876487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.863e-22 Identity = 75/201 (37.31%), Postives = 102/201 (50.75%), Query Frame = 1 Query: 28 FSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSHPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLG---------HISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLR-SIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLP 600 FSN L NS+ ++ T +N++ + + P P P SV + + H + K + L+D ++S AT+ SA + ++DQ+ E KNE+G S G ++ S+QREAAL KFR+KRKDRCY+KKVRYESRKKLAEQRPR+KGQFVRQV S P Sbjct: 390 FSNQL---NSWPGQSSYPTPTPINNIQFRDPNTAYTSAMAPASLS-PSPSSVSPHEYSSMFHPFNSKPEGLQDRDCSMDVDERRYVSSATEHSAIGN----------------------HIDQLI------EKKNEDGYSLSVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQAP 558
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.152e-21 Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 253 HISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVH 585 H+SP T +S SS+ + A L+ GS C S+SN + +N +GL + QREAALNKFRLKRKDRC++KKVRY+SRK LAEQRPRVKGQFVRQ H Sbjct: 518 HVSPTTGESGSSTVLDSARKTLS----GSVCDSSSNHMIAPTESSNVVPENPDGLRHLS------QREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDH 618
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 346 GSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 591 GS S + + AG++++ K +E RS QREAAL KFRLKRKDRC+DKKVRY+SRKKLAEQRPRVKGQFVR V+S+ Sbjct: 384 GSQSTNEGI-AGQSSSTEKPKEEESAKQRWSRS-QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.208e-16 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 331 YGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNG----NL----RSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGNISD 636 YGS+ G N+ + + A ++ N +G +G NL + QREAAL KFR KRK+RC+ KKVRY+SRKKLAEQRPRV+GQFVR+ + T +N NI D Sbjct: 621 YGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAAT----DDNDIKNIED 726
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16 Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 220 DHKLDSLEDLGHISPATDQSASSSFCNGAVS--RLNSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 579 D+K+ L H ++ SA S + NGA S + S +S + ++ +++++ ++ S+G+ R QREAAL KFRLKRK+RC++KKVRY SRKKLAEQRP VKGQF+R+ Sbjct: 370 DYKVGDRSVLRH----SNLSAFSKYNNGATSAKKAPEENVESCSPHDSPIAKLLGSSSSSDNPLKQ---QSSGSDRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 439 RSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVH 585 RS +R AAL KFRLKRK+RC+DKKVRY +RKKLAE RPRV+GQFVRQ + Sbjct: 439 RSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQAN 487
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 448 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGNISD 636 +RE AL KFR KR RC+DKK+RY +RK+LAE+RPRVKGQFVR+++ + L + S + D Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSADYDD 594
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12 Identity = 69/213 (32.39%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 10 TDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSHPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPAT------DQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAE----SKNEEGLFPSNGN----------LRSIQRE---AALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 579 T+ E+ S N +T A + + + TG K E+A ++ +R P V + + + H S E+ G +P D N V+ NS + G N + V A R E + N+ G NG+ R QRE AA+ KFR KRK+R + KKVRY+SRK+LAEQRPRV+GQFVRQ Sbjct: 513 TNKERVMSPSAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVA-NNAAKRAQPGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12 Identity = 69/213 (32.39%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 10 TDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSHPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPAT------DQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAE----SKNEEGLFPSNGN----------LRSIQRE---AALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 579 T+ E+ S N +T A + + + TG K E+A ++ +R P V + + + H S E+ G +P D N V+ NS + G N + V A R E + N+ G NG+ R QRE AA+ KFR KRK+R + KKVRY+SRK+LAEQRPRV+GQFVRQ Sbjct: 513 TNKERVMSPSAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVA-NNAAKRAQPGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
BLAST of FC876487 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12 Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 1 Query: 451 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 591 REAALNKFR KRK R + KKVRY+SRK+LAEQRPR++GQFVRQ E Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758 The following BLAST results are available for this feature:
BLAST of FC876487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876487 ID=FC876487; Name=FC876487; organism=Citrus clementina; type=EST; length=829bpback to top |