FC876511

Overview
NameFC876511
Unique NameFC876511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLC1_SOLTU (Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 357.066 bits (915), Expect = 4.759e-98
Identity = 182/218 (83.49%), Postives = 193/218 (88.53%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRAAVKIPVVSENEGGNGTLPGGSALNAAGETPSEASS 661
            GDFSTATGIATFTMMLLSQ++FDK+GWG AAKITPTVLLLTGVGFFSLLLFG PL P LAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA+STPYLGG+LLVIVLAWLGAA+SLD QFT LRQ         RA++KIPVVS+NE GNG L   S+LN AG   + ASS
Sbjct:  406 GDFSTATGIATFTMMLLSQWIFDKYGWGAAAKITPTVLLLTGVGFFSLLLFGAPLAPTLAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMERASLKIPVVSQNENGNGPLSSESSLNPAGGDSTNASS 623          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLC1_ARATH (ADP,ATP carrier protein 1, chloroplastic OS=Arabidopsis thaliana GN=AATP1 PE=1 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 4.936e-87
Identity = 166/217 (76.50%), Postives = 183/217 (84.33%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGNGTLPGGSALNAAGETPSEA 655
            GDFST TG+ATFTMMLLSQ+VF+K+GWGVAAKITPTVLLLTGV FFSL+LFG P  P +AK GMTPLLAAVYVGA+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMIL+FGSLANSTPYLG ILLVIV AWL AA+SL+ QF +LR          RA +VKIPVVS++E GNG+L         GE+PS +
Sbjct:  408 GDFSTCTGVATFTMMLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVKIPVVSQDESGNGSL---------GESPSSS 615          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLC2_ARATH (ADP,ATP carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=AATP2 PE=1 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 9.633e-83
Identity = 158/199 (79.40%), Postives = 169/199 (84.92%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGNG 601
            GDFST TGIATFTMMLLSQ+VF K+GWGVAAKITPTVLLLTGV FFSL+LFG P  P +AK GMTPLLAAVYVGA+QNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLG ILL IV AWL AA+SL+ QF  L           RA +VKIPVVS+ +  +G
Sbjct:  405 GDFSTCTGIATFTMMLLSQYVFKKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNTLMSEEELEREMERASSVKIPVVSQEDAPSG 603          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLC1_CHLPN (ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae GN=tlcA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.077e-41
Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 2
Query:    8 GDFSTATGIATFTMML-LSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 514
            G+FS  TG+ +  +ML +   V  KFGW   A +TP ++LLTG+ FF+L++F +     +A FG TPL+ AV VGA+QNI SKS KY+LFD  KEMAYIPLD++ KVKGKAAIDVV    GKSGGALIQQ +++  GS+   TPYL  ILL I+  WL +A  L+  F A
Sbjct:  327 GNFSFWTGVVSVLIMLFVGGNVIRKFGWLTGALVTPVMVLLTGIVFFALVIFRNQASGLVAMFGTTPLMLAVVVGAIQNILSKSTKYALFDSTKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGALIQQGLLVICGSIGAMTPYLAVILLFIIAIWLVSATKLNKLFLA 496          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLC1_CHLTR (ADP,ATP carrier protein 1 OS=Chlamydia trachomatis GN=tlcA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39
Identity = 85/170 (50.00%), Postives = 114/170 (67.06%), Query Frame = 2
Query:    8 GDFSTATGIAT-FTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 514
            G+FS  TG+ + F M+ +   V  +FGW   A +TP ++L+TG  FF+L++F D     +A  G TPL+ AV VGA+QNI SKS KY+LFD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS+   TP+L   L  I++ WL +A  L+  F A
Sbjct:  325 GNFSFWTGVVSVFVMLFIGGNVIRRFGWLTGALVTPIMVLVTGAVFFALVIFRDHATGLVAALGTTPLMLAVVVGAIQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSIGAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLC1_CHLMU (ADP,ATP carrier protein 1 OS=Chlamydia muridarum GN=tlcA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.317e-39
Identity = 85/170 (50.00%), Postives = 114/170 (67.06%), Query Frame = 2
Query:    8 GDFSTATGIAT-FTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 514
            G FS  TG+ + F M+ +   V  +FGW   A +TP ++L+TG  FF+L++F D     +A  G TPL+ AV VGA+QNI SKS KY+LFD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS++  TP+L   L  I++ WL +A  L+  F A
Sbjct:  325 GTFSFWTGVVSVFVMLFIGGNVIRRFGWLTGALVTPVMVLVTGAIFFALVIFRDHATGLVAALGTTPLMLAVVVGAVQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSISAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLCA_RICBR (ADP,ATP carrier protein 1 OS=Rickettsia bellii (strain RML369-C) GN=tlcA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 69/173 (39.88%), Postives = 98/173 (56.65%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKF-GMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSL--ANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 517
            G F    G      M++   +  K  W  AA ITP ++L+TG+ FF+ + F   +   L       PL  AV +G +QN+ SK  KYSLFD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +L    +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  320 GQFQAYQGWVAIAFMIIGSNILRKVSWLTAAMITPLMMLITGIAFFAFIFFDSVIAMYLTGILASGPLALAVMIGTIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFIIFPALGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLCA_RICPR (ADP,ATP carrier protein 1 OS=Rickettsia prowazekii GN=tlcA PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.552e-31
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKF-GMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 517
            G F    G      ML+   +  K  W  AA ITP ++ +TG  FFS + F   +   L      +PL  AV +G +QN+ SK  KYSLFD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ   F++        +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  320 GQFQFYQGWVAIAFMLIGSNILRKVSWLTAAMITPLMMFITGAAFFSFIFFDSVIAMNLTGILASSPLTLAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPVFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLCA_RICTY (ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=tlcA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.460e-30
Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKF-GMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA--NSTPYLGGILLVIVLAWLGAARSLDTQFTAL 517
            G F    G      ML+   +  K  W  AA ITP ++ +TG  FFS + F   +   L      +PL  AV  G +QN+ SK  KYSLFD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ    + F +     +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  320 GQFQFYQGWVAIAFMLIGSNILRKVSWLTAAMITPLMMFITGAAFFSFIFFDSVIAMNLTGILASSPLTLAVMFGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPAFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of FC876511 vs. ExPASy Swiss-Prot
Match: TLCA_RICFE (ADP,ATP carrier protein 1 OS=Rickettsia felis GN=tlcA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.490e-30
Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = 2
Query:    8 GDFSTATGIATFTMMLLSQFVFDKFGWGVAAKITPTVLLLTGVGFFSLLLFGDPLGPALAKF-GMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGS--LANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 517
            G F    G      ML+   +  K  W  AA ITP ++L+TG  FF+ + F   +   L       PL  AV +G +QN+ SK  KYSLFD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +     +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  320 GKFQFYQGWVAIAFMLIGSNILRKVSWLAAAMITPLMMLITGAAFFAFIFFDSVIAMHLTGILASGPLALAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFILFPAFGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
The following BLAST results are available for this feature:
BLAST of FC876511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
TLC1_SOLTU4.759e-9883.49Plastidic ATP/ADP-transporter OS=Solanum tuberosum... [more]
TLC1_ARATH4.936e-8776.50ADP,ATP carrier protein 1, chloroplastic OS=Arabid... [more]
TLC2_ARATH9.633e-8379.40ADP,ATP carrier protein 2, chloroplastic OS=Arabid... [more]
TLC1_CHLPN1.077e-4153.53ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae ... [more]
TLC1_CHLTR1.009e-3950.00ADP,ATP carrier protein 1 OS=Chlamydia trachomatis... [more]
TLC1_CHLMU1.317e-3950.00ADP,ATP carrier protein 1 OS=Chlamydia muridarum G... [more]
TLCA_RICBR2.252e-3139.88ADP,ATP carrier protein 1 OS=Rickettsia bellii (st... [more]
TLCA_RICPR6.552e-3139.88ADP,ATP carrier protein 1 OS=Rickettsia prowazekii... [more]
TLCA_RICTY1.460e-3039.88ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=t... [more]
TLCA_RICFE2.490e-3039.88ADP,ATP carrier protein 1 OS=Rickettsia felis GN=t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CF06RM1 EHR Citrus clementina cDNA clone KN0AAN2CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876511 ID=FC876511; Name=FC876511; organism=Citrus clementina; type=EST; length=663bp
GCACGAGGGAGACTTCTCAACAGCTACTGGAATAGCAACATTCACGATGA
TGCTTCTAAGTCAATTTGTATTTGATAAATTTGGATGGGGAGTTGCTGCG
AAGATCACACCCACAGTCCTCCTGCTTACAGGAGTTGGTTTCTTTTCTCT
ACTATTATTTGGGGATCCTCTGGGACCTGCTCTTGCGAAGTTCGGAATGA
CTCCTCTTCTTGCTGCTGTATATGTGGGTGCCATGCAAAATATTTTCAGT
AAGAGTGCCAAGTACAGCTTGTTTGATCCTTGCAAAGAAATGGCCTACAT
TCCATTAGATGAAGACACCAAGGTTAAAGGGAAGGCAGCCATCGATGTTG
TGTGCAACCCGTTGGGGAAATCTGGAGGAGCTCTTATTCAGCAGTTTATG
ATATTAACCTTTGGGTCCCTTGCGAATTCAACTCCTTATCTTGGGGGGAT
ACTTTTGGTGATTGTTCTTGCATGGTTAGGAGCAGCCAGGTCTTTAGATA
CCCAATTTACAGCTTTGCGTCAGGAAGAAGAGCTTGAGAAGGAGATGGAA
AGAGCTGCTGTTAAGATCCCAGTTGTCTCTGAAAATGAAGGCGGGAATGG
TACTCTTCCAGGTGGATCAGCTTTGAATGCAGCAGGTGAGACACCCAGTG
AAGCATCTAGTCC
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