FC876514

Overview
NameFC876514
Unique NameFC876514
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length859
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC876514 vs. ExPASy Swiss-Prot
Match: NUDT3_ARATH (Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 PE=1 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 4.655e-116
Identity = 204/261 (78.16%), Postives = 231/261 (88.51%), Query Frame = 1 
Query:   13 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 795
            AAPIRVIQLIYNSGDVKGPQTVA+NLPNDE+IVKDRGTSMVMLKNV EAKF++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIGPH+ITLP G+ STVR ELQE+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+T PLK AL+ LE V+VPVDI+PTF     L+
Sbjct:  511 AAPIRVIQLIYNSGDVKGPQTVAYNLPNDEKIVKDRGTSMVMLKNVQEAKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 771
The following BLAST results are available for this feature:
BLAST of FC876514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NUDT3_ARATH4.655e-11678.16Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN2CF10RM1 EHR Citrus clementina cDNA clone KN0AAN2CF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876514 ID=FC876514; Name=FC876514; organism=Citrus clementina; type=EST; length=859bp
GCACGAGGCATTGCTGCTCCCATTCGTGTCATTCAGCTTATTTATAACTC
AGGAGATGTGAAAGGTCCTCAGACTGTTGCTTTCAATTTGCCTAATGATG
AGCGTATAGTAAAAGATCGAGGAACATCAATGGTTATGCTTAAAAATGTT
TCAGAAGCAAAGTTCAAGAATATTCTTCGGCCCATAGCTGATGTATGTAT
CAGAAAGGAACAGCAGGAACTTGTAGATTTTGATTCTTTCTTCACTCACA
ACATCTGCCATGAGTGCTGCCATGGTATTGGGCCTCATAGCATCACACTT
CCAGATGGTCGACAGTCTACAGTGAGATTGGAACTGCAAGAACTTCACTC
AGCTATGGAAGAAGCAAAAGCTGACATTGTTGGCCTTTGGGCACTGAAGT
TTCTAATCGGCAGGGATTTGCTTCCAAAGAGTTTGGTGAAATCCATGTAT
GTCTCTTTCCTGGCGGGGTGTTTCCGTTCAGTGCGATTTGGCTTAGAGGA
ATCTCATGGAAAAGGACAAGCACTGCAGTTTAACTGGTTGTTTGAGAAAG
AAGCCTTTATTCTGCATTCAGATGATACCTTTTCTGTTGATTTTGACAAG
GTTGAAGGTGCAGTCGAAAGCCTGAGTACAGAAATACTCACCATACAGGC
AAGAGGTGACAAAGAGGCTGCAAGTTTGCTTCTTCAGAAATATTGTACAA
TGACACAGCCACTAAAAGTTGCATTACAAAAATTGGAGAACGTTCAGGTT
CCTGTGGATATAGCTCCCACATTCACTGCAGTCAACAAATTGCTGCAGTA
AAGGAAACTACATGGAATGTGATGATTAAAAAGGAACTTTTTCACCAATC
AAGTCCTGA
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