FC876538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876538 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.623e-48 Identity = 105/158 (66.46%), Postives = 124/158 (78.48%), Query Frame = 1 Query: 187 MVKKPLTTSFFNGG-VGALKVTRLRIAPSRRSYCYTQGGGALNTRMNLFDRLSRLVKSYAHAILISFEDP*KIL*QAVLEMNDDLVKMRHATAQLLASHKRLEHKYKAAYQASEHWYRKSQLALQKREQDLAREALNRRKSYADNANALKAQLDQQNN 657 ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR +R+VKSYA+A++ +FEDP KIL QAVLEMNDDL KMR ATAQ+LAS KRLE+KYKAA QASE WYRK+QLALQK E+DLAREAL RRKS+ADNA++LKAQLDQQ + Sbjct: 22 LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKS 173
BLAST of FC876538 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.898e-45 Identity = 103/187 (55.08%), Postives = 127/187 (67.91%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTXXXXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSRRSYCYTQGGGALNTRMNLFDRLSRLVKSYAHAILISFEDP*KIL*QAVLEMNDDLVKMRHATAQLLASHKRLEHKYKAAYQASEHWYRKSQLALQKREQDLAREALNRRKSYADNANALKAQLDQQ 651 MA K+ VTG P+ C ++ PL TSFF GAL+V LR+A R C G GA MNLF+R SR+VKSYA+A++ SFEDP KIL Q V+EMN DL KMR ATAQ+LAS K+L++KYKAA Q+S+ WY+++QLAL K ++DLAREAL RRKS+ADNA ALK QLDQQ Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQ 182
BLAST of FC876538 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.140e-43 Identity = 98/150 (65.33%), Postives = 116/150 (77.33%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSRRSYCYTQGGGALNTRMNLFDRLSRLVKSYAHAILISFEDP*KIL*QAVLEMNDDLVKMRHATAQLLASHKRLEHKYKAAYQASEHWYRKSQLALQKREQDLAREALNRRKSYADNANALKAQLDQQ 651 L TSF NG V +L++ ++R + R C R NL DR SR+VKSYA+A+L SFEDP KIL QAVLEMNDDL KMR ATAQ+LAS KRLE+KYKAA QAS+ WYR++QLALQK ++DLAREAL RRKSYADNA++LKAQLDQQ Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQ 168
BLAST of FC876538 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.722e-19 Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 319 MNLFDRLSRLVKSYAHAILISFEDP*KIL*QAVLEMNDDLVKMRHATAQLLASHKRLEHKYKAAYQASEHWYRKSQLALQKREQDLAREALNRRKSYADNANALKAQLDQQ 651 M LFDRL R+V++ + ++ EDP K+L QAV++M +DLV++R A A+ +A KR E + Q ++ W +++LAL E++LAREAL R+KS D A A + QL QQ Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQ 111 The following BLAST results are available for this feature:
BLAST of FC876538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876538 ID=FC876538; Name=FC876538; organism=Citrus clementina; type=EST; length=658bpback to top |