FC876546

Overview
NameFC876546
Unique NameFC876546
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8083 contig Ccv1_Contig8083:205..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.704e-54
Identity = 104/226 (46.02%), Postives = 144/226 (63.72%), Query Frame = 2
Query:   59 VPTIDLSGVDSDHL-RPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSND 733
            +PTIDL G  +D + R ++VEKI  A+ + GFFQV+NHGI ++VLE+++  I+ FHEQ  E+K   Y R+    + Y SN DLF S AA+WRDTL        P  E++P  C +  +E++  V K                T+ LK+       +++GHYYP CPQPDLT+G+T H+D   LTILLQD  GGLQ+ H + WVDV PVPGALV+N+GD+LQ+++ND
Sbjct:   62 IPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITND 287          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.438e-48
Identity = 99/237 (41.77%), Postives = 149/237 (62.87%), Query Frame = 2
Query:   32 SKTRPVSDV-VPTIDLSGVDSD-HLRPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRREN-TKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSND 733
            S  R  SD+ +P I+L+G+ S+  +R  IVEKI  AS + GFFQ+VNHGI  +V++++V  ++ FHEQ  +IK   Y R+   K   Y SN  L    A +WRDT++  +   +P+ +E P++CR   ++++++V+                K + L+E    EG +++GHYYP CPQP+LT G + H+D G LTIL+QD  GGLQI    +W+DV  +PGALVINI D+LQ+++ND
Sbjct:   81 SVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITND 317          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.878e-48
Identity = 105/243 (43.21%), Postives = 139/243 (57.20%), Query Frame = 2
Query:   20 LRPKSKTRPVSD--VVPTIDLSGVDSDHLR-PTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSK--AASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSND 733
            L PK + +      V P IDL G+D D ++   IV+K+  AS + GFFQVVNHGI   VL+R ++  + F EQ  E+K   Y R+  K V Y SN+DL+ S   AASWRDT+   +    P L+E P  C +  ++++  VKK                   LK+           +YYP CPQP+LT+G   HTD G +TILLQDD GGLQ+ H   WVDV P PG+LV+NIGD LQ++SND
Sbjct:   43 LPPKDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSND 285          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.184e-48
Identity = 96/234 (41.03%), Postives = 142/234 (60.68%), Query Frame = 2
Query:   41 RPVSDVV--PTIDLSGV-DSDHLRPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSND 733
            +P S VV  PTIDL GV +S  +R ++V K+  A  + GFFQ +NHG+ ++V+E+++  I+ FH+Q PE++   Y R+ TK + Y SN DL+ S AASWRDTL   +    P+ +++PE+C +  +E++  V K                 + LKE    +G  M+ H +P CP+P+ T G   HTD   LTILL D+ GGLQ+ +   W+DV P P AL+ N+GD LQ++SND
Sbjct:   47 KPTSTVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISND 280          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.296e-46
Identity = 90/227 (39.65%), Postives = 137/227 (60.35%), Query Frame = 2
Query:   59 VPTIDLSGVDSDHL--RPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSND 733
            +PTIDL G D      R   +E+I  A+ + GFFQV+NHG+ +E+LE++ + ++ FHEQ  E++   Y R+ ++   Y+SN DLF S AA+WRDT    +    P+ +++PEICR   +E++  V                 + + L +    +G +M+ HYYP CP+PDLT+G + H+D   LT+LL D   GLQ++    W DV  V GAL+INIGD+LQ+++ND
Sbjct:   64 IPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITND 290          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.916e-46
Identity = 93/227 (40.97%), Postives = 139/227 (61.23%), Query Frame = 2
Query:   59 VPTIDLSGVD-SDHLR-PTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSND 733
            +PTIDL G D  D ++    +E I  A+ + GFFQV+NHG+ +E+LE++   ++ FHEQPPE++  +Y R+  +   Y+SN DL+ + AA+WRDT    +    PE +++PEICR   +E++  V                   + LK+   L+G  M+ HY+P CP+PDLT G + H+D   LT+LL D+  GLQ+     W DV  VPGAL+INIGD+LQ+++ND
Sbjct:   64 IPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITND 290          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27
Identity = 79/242 (32.64%), Postives = 117/242 (48.35%), Query Frame = 2
Query:   23 RPKSKTRPVSDVVPTIDLSGVDSDHLRPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPE----LEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSN 730
            RPK      S+ +P I L+G+D +  R  I  KI  A  + G FQVV+HG+G +++  + R  + F   P E K         KG  +I +  L       WR+ +      T         + PE   K   E+++ +                 + + L +      + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PVPGA V+N+GD    +SN
Sbjct:   29 RPKVAYNEFSNDIPVISLAGIDGEK-RGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKG-GFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSN 268          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27
Identity = 79/246 (32.11%), Postives = 116/246 (47.15%), Query Frame = 2
Query:   23 RPKSKTRPVSDVVPTIDLSGVDS-DHLRPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI--KHGEEWVDVKPVPGALVINIGDILQIMSN 730
            RPK      SD +P I L+G+D  D  R  I  +I  A    G FQVV+HG+   ++  + R  + F   PPE K         KG   +S+    H +  + +D  +I    + P          + PE   K   E++  +                 + + L        + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ    +G+ W+ V+PV GA V+N+GD    +SN
Sbjct:   26 RPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSN 267          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.639e-26
Identity = 77/247 (31.17%), Postives = 118/247 (47.77%), Query Frame = 2
Query:   23 RPKSKTRPVSDVVPTIDLSGVDSDHL--RPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSN 730
            RPK      SD +P I L+G+D D +  R  I  KI  A  + G FQVV+HGI ++++  + R  + F   P E K         KG   +S+    H +  + +D  +I    + P          + PE  R     ++  +                 + + L +      + ++ +YYP CPQP+LT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PV GA V+N+GD    +SN
Sbjct:   26 RPKIAYNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSN 268          
BLAST of FC876546 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26
Identity = 78/246 (31.71%), Postives = 114/246 (46.34%), Query Frame = 2
Query:   23 RPKSKTRPVSDVVPTIDLSGVDS-DHLRPTIVEKIARASRELGFFQVVNHGIGVEVLERVVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKKXXXXXXXXXXXXXXXKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSN 730
            RPK      SD +P I L+G+D  D  R  I  +I  A    G FQVV+HG+   ++  + R  + F   PPE K         KG   +S+    H +  + +D  +I    + P          + P+   K   E++  +                 + + L        + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G  W+ V+PV GA V+N+GD    +SN
Sbjct:   25 RPKVAYNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSN 266          
The following BLAST results are available for this feature:
BLAST of FC876546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ACCH1_ARATH8.704e-5446.021-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO1.438e-4841.77Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_SOLLC1.878e-4843.211-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH4.184e-4841.03Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
ACCH3_ARATH2.296e-4639.651-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH3.916e-4640.971-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_DIACA3.117e-2732.64Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_ARATH9.070e-2732.11Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_PETCR2.639e-2631.17Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_MATIN3.447e-2631.71Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1AB05RM1 EHR Citrus clementina cDNA clone KN0AAN1AB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876546 ID=FC876546; Name=FC876546; organism=Citrus clementina; type=EST; length=735bp
GCACGAGGCTCTTGCCGAGCTCAGACCCAAGTCAAAGACCCGGCCCGTCT
CTGATGTAGTCCCCACCATCGATTTATCGGGCGTTGACTCGGACCATCTG
CGGCCGACGATTGTGGAAAAGATAGCACGCGCGTCGCGGGAGCTGGGGTT
CTTTCAGGTTGTGAATCACGGCATCGGAGTTGAGGTCTTGGAGCGTGTGG
TTCGGGCCATTAAAGGGTTTCATGAACAGCCGCCGGAGATCAAGGCGCCG
GTGTATCGGAGGGAGAACACCAAAGGCGTGTCTTACATTTCCAACATCGA
TTTGTTTCACTCTAAAGCTGCCAGCTGGAGGGACACACTGCAGATAAGGC
TAGGTCTGACGGAACCAGAGCTTGAAGAAGTTCCTGAAATATGTAGGAAA
GAGGCAGTCGAGTGGAACCACCATGTAAAAAAGCTCGGAGAGCTTTTGTT
TGGGCTGCTGTGTGAAGGTTTGGGGTTGAAAACCGATAAGTTGAAGGAAA
ATACCTTCCTGGAAGGGAGGATGATGGTGGGCCATTATTATCCCTACTGT
CCGCAGCCTGATCTGACAGTGGGGATCACATCTCATACTGATCCAGGGCC
ATTGACAATCTTGTTGCAAGATGATAAAGGTGGGCTGCAAATTAAGCATG
GTGAGGAATGGGTGGATGTTAAACCAGTTCCAGGAGCTCTGGTTATTAAC
ATTGGAGATATACTTCAGATTATGTCCAATGATGA
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