FC876551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2) HSP 1 Score: 357.066 bits (915), Expect = 5.159e-98 Identity = 171/210 (81.43%), Postives = 181/210 (86.19%), Query Frame = 2 Query: 65 MPPKQQ--SKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLKSQMNAL 688 MPPK+ SKA+LAKKQK+VEDKTFGLKNKNKSKNVQKYVQ+L Q VQPKPD +K LNDLFK+AVSQPKVPVGVDPKSI+CEF+K GQCQKGFKCKFSHDLNVQRKGEKIDIY+DKRD ETMEDWDQETLEKVV SK EYQQNKPTDIVCKYFL+AVEKKQYGWFWVCPNGG DCHYRHALPPGYVLKSQM AL Sbjct: 1 MPPKKAAPSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLHQAVQPKPDPTKTAAKKKKEEEKAREKELNDLFKVAVSQPKVPVGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIYTDKRDAETMEDWDQETLEKVVASKGAEYQQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKAL 210
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 2.831e-96 Identity = 166/209 (79.43%), Postives = 181/209 (86.60%), Query Frame = 2 Query: 65 MPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKE-TMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLKSQMNAL 688 MPPKQQ KA+LAKKQK VEDKTFGLKNKNKSKNVQKYVQ+LKQ+VQPKPD +K LN+LFK+A+SQPKVPVGVDPKSILCEF+KAGQCQKGFKCKFSHDLN+QRKGEKIDIYSD RD++ M++WDQETLEKVVESK EY QNKPTDIVCKYFL+AVEKKQYGWFW CPNGG +CHYRHALPPGYVLKSQM AL Sbjct: 1 MPPKQQPKADLAKKQKQVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDATKAAAKKKKEEEKAREQELNELFKVAISQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDTRDEDGDMDEWDQETLEKVVESKKNEYNQNKPTDIVCKYFLDAVEKKQYGWFWSCPNGGKECHYRHALPPGYVLKSQMKAL 209
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_RAT (Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.052e-54 Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLK 670 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLEA+E +YGWFWVCP GG +C YRHALPPG+VLK Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLK 218
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_MOUSE (Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.052e-54 Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLK 670 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLEA+E +YGWFWVCP GG +C YRHALPPG+VLK Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLK 218
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_HUMAN (Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.680e-54 Identity = 111/219 (50.68%), Postives = 143/219 (65.30%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLK 670 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLK 218
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_BOVIN (Zinc finger CCCH domain-containing protein 15 OS=Bos taurus GN=ZC3H15 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.680e-54 Identity = 111/219 (50.68%), Postives = 143/219 (65.30%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLK 670 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLK 218
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENTR (Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.572e-54 Identity = 110/211 (52.13%), Postives = 139/211 (65.88%), Query Frame = 2 Query: 71 PKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLK 670 P+ K E KK+KI+EDKTFGLKNK +K QK+++N+ V Q P Q++ LNDLFK V+ KV G DPKS++C FYK GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK Sbjct: 10 PQSGKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVIHQVKFGQQNPRLVAQAEGEKKTKKDDKKKELLELNDLFKPVVAAQKVSKGADPKSVVCAFYKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDEELEKDTMENWDEKKLEEVVNKKHGEAEKIKPKTQIVCKFFLEAIENNKYGWFWVCPGGGDMCMYRHALPPGFVLK 219
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53 Identity = 109/219 (49.77%), Postives = 143/219 (65.30%), Query Frame = 2 Query: 65 MPPKQQS-------KAELAKKQKIVEDKTFGLKNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLK 670 MPPK+Q KA+ KK+KI+EDKTFGLKNK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCKYFL+A+E +YGWFWVCP GG +C YRHALPPG+VLK Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEDLEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLK 219
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENLA (Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53 Identity = 108/213 (50.70%), Postives = 138/213 (64.79%), Query Frame = 2 Query: 71 PKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNK-PTDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLKSQ 676 P+ K E KK+KI+EDKTFGLKNK +K QK+++N+ V Q P Q++ LNDLFK V KV G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ K T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK + Sbjct: 10 PQASKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVTHQVKSGQQNPRLVAQAEGDKKNKKDDKMKELQELNDLFKPVVVAQKVSKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDDELEKDTMENWDEKKLEEVVNKKHGEAEKIKAKTQIVCKFFLEAIENNKYGWFWVCPGGGDTCMYRHALPPGFVLKKE 221
BLAST of FC876551 vs. ExPASy Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 108/213 (50.70%), Postives = 135/213 (63.38%), Query Frame = 2 Query: 65 MPPKQ-QSKAELAK-KQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV-----QPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAG-QCQKGFKCKFSHDLNVQRKGEKIDIYSDKR-DKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGTDCHYRHALPPGYVLKSQ 676 MPPKQ QSK + K K+K VEDKTFGLKNKNKSK V YV ++ V Q K K + + Q KVP+GVDPKSI+CE++K G C KG +CKF+HDL RK EKIDIY+D+R D++TME+WD+ L+ VVE K + KPT I+CK+FL+A+E K+YGWFW CPNGG C Y+H LP GY LK + Sbjct: 1 MPPKQAQSKKTVEKEKKKKVEDKTFGLKNKNKSKKVAAYVSQVEAQVKHSGLQNKEAALKEKAKRDKELAEKAKKEAESILVNTIVQSKVPLGVDPKSIVCEYFKQGVTCPKGNRCKFAHDLAAGRKSEKIDIYTDRRKDEDTMENWDEAKLKSVVEKKRTTENKAKPTAIICKFFLDAIESKKYGWFWECPNGGEKCAYQHCLPEGYQLKKK 213 The following BLAST results are available for this feature:
BLAST of FC876551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876551 ID=FC876551; Name=FC876551; organism=Citrus clementina; type=EST; length=689bpback to top |