FC876552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 2.905e-39 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RARI LINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVL MLEMDDEY Sbjct: 31 RARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEY 119
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 2.905e-39 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RARI LINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVL MLEMDDEY Sbjct: 31 RARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEY 119
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.082e-37 Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RARI LINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVL MLEMD EY Sbjct: 31 RARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEY 119
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.926e-36 Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RARI L NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EY Sbjct: 32 RARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEY 120
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 3.926e-36 Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RARI L NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EY Sbjct: 32 RARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEY 120
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.050e-33 Identity = 71/89 (79.78%), Postives = 75/89 (84.27%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RARI L NQDKNKYNTPKYRFV TNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EY Sbjct: 35 RARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEY 120
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 65/89 (73.03%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 10 RARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 RAR L+ QDKNKYNTPKYR V+RFTN DII QI+ A I GD VL +AYAHELPRYG++VGLTNYAAAYCTGLLLARR+L L + D+Y Sbjct: 31 RARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKY 119
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31 Identity = 63/88 (71.59%), Postives = 73/88 (82.95%), Query Frame = 1 Query: 13 ARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 AR L+ QDKNKYNTPKYR +VRFTNKDI+ QI A I GD V+ AAYAHELPRYG++VGLTNYAAAYCTGLLL+RR+LN +D+ Y Sbjct: 32 ARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIY 119
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 9.366e-30 Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 13 ARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 AR L+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+LN MD Y Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIY 119
BLAST of FC876552 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 9.366e-30 Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 13 ARIPLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLNMLEMDDEY 276 AR L+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+LN MD Y Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIY 119 The following BLAST results are available for this feature:
BLAST of FC876552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876552 ID=FC876552; Name=FC876552; organism=Citrus clementina; type=EST; length=276bpback to top |