FC876554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876554 vs. ExPASy Swiss-Prot
Match: TPK1_HUMAN (Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 49/152 (32.24%), Postives = 83/152 (54.61%), Query Frame = 3 Query: 3 GGANRVYDELPQLFPHEDPSDIRRRYKPDLIKGDMDSIRKEVMDFYASLGTKVVYESHDQDATDLHKCVAYIRDCTPNL*KSNLR---ILVAGALGGRFDHDAGNINVLYRFSDI---QIILLSDDCHIQLLPKTHRHDIYIQSSVEGPHCG 440 GGANR+YD R + P+ I GD DSIR EV ++YA+ G +++ + DQD TD KC+ ++ + + +L+ I+ G L GRFD ++N L++ + I II++ ++ I LL + +H +++ + +EG CG Sbjct: 47 GGANRLYDIT---------EGERESFLPEFINGDFDSIRPEVREYYATKGCELI-STPDQDHTDFTKCLKMLQ---KKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLL-QPGKHRLHVDTGMEGDWCG 184
BLAST of FC876554 vs. ExPASy Swiss-Prot
Match: TPK1_MOUSE (Thiamin pyrophosphokinase 1 OS=Mus musculus GN=Tpk1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.044e-13 Identity = 48/149 (32.21%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 3 GGANRVYDELPQLFPHEDPSDIRRRYKPDLIKGDMDSIRKEVMDFYASLGTKVVYESHDQDATDLHKCVAYIRDCTPNL*KSNLRILVAGALGGRFDHDAGNINVLYR---FSDIQIILLSDDCHIQLLPKTHRHDIYIQSSVEGPHCG 440 GGAN +YD L E R + P+ + GD DSIR EV ++Y G ++ + DQD TD KC+ ++ I+ G LGGRFD ++N L++ + + II++ D I LL + +H +++ + +EG CG Sbjct: 47 GGANHLYD----LTEGE-----RESFLPEFVSGDFDSIRPEVKEYYTKKGCDLI-STPDQDHTDFTKCLQVLQRKIEEKELQVDVIVTLGGLGGRFDQIMASVNTLFQATHITPVPIIIIQKDSLIYLL-QPGKHRLHVDTGMEGSWCG 184
BLAST of FC876554 vs. ExPASy Swiss-Prot
Match: TPK1_BOVIN (Thiamin pyrophosphokinase 1 OS=Bos taurus GN=TPK1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.007e-12 Identity = 44/149 (29.53%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 3 GGANRVYDELPQLFPHEDPSDIRRRYKPDLIKGDMDSIRKEVMDFYASLGTKVVYESHDQDATDLHKCVAYIRDCTPNL*KSNLRILVAGALGGRFDHDAGNINVLY---RFSDIQIILLSDDCHIQLLPKTHRHDIYIQSSVEGPHCG 440 GGAN +YD R + P+ I GD DSIR EV + YA G +++ + DQD TD KC+ ++ I+ G L GRFD +++ L+ + + + +I++ ++ I LL + +H +++ + +EG CG Sbjct: 47 GGANHLYDVT---------EGERESFLPEFISGDFDSIRPEVREHYAIKGCEII-STPDQDHTDFTKCLEVLQKKIEEKDLQVDMIVTLGGLAGRFDQIMASVSTLFQAPQITSLPVIIIQEESLIYLL-QPGKHKLHVDTGMEGDWCG 184 The following BLAST results are available for this feature:
BLAST of FC876554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876554 ID=FC876554; Name=FC876554; organism=Citrus clementina; type=EST; length=441bpback to top |