FC876576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.042e-103 Identity = 183/223 (82.06%), Postives = 202/223 (90.58%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTRK 678 RARIRLINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLE+ LTNYAAAYCTGLLLARRVLKMLEMD EY+GNVEATGEDYSVEP DTRRPFRALLDVGLI+TTTGNRVFGALKGALDGGL IPH+DKRFAG++ +G+QLD +VHRKYI+GGHVAAYM TLMEDEP+ Y SHF+EYIKKGI+AD L LYKKV AAI A P K Sbjct: 31 RARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAK 253
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 7.013e-100 Identity = 175/221 (79.19%), Postives = 195/221 (88.24%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPT 672 RARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLE+ LTNYAAAYCTGLLLARRVLK+ +D EY+GN+EATGEDY VEP D RRPFRALLDVGLI+TTTGNRVFGALKGALDGGL IPH+DKRFAGF D KQLD+D+HRKYIYGGHVA YM ++ E+EP+ + +HF+EY+KKGIDADG+ ALYKKV AAI A PT Sbjct: 32 RARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPT 252
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 363.229 bits (931), Expect = 7.013e-100 Identity = 175/221 (79.19%), Postives = 195/221 (88.24%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPT 672 RARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLE+ LTNYAAAYCTGLLLARRVLK+ +D EY+GN+EATGEDY VEP D RRPFRALLDVGLI+TTTGNRVFGALKGALDGGL IPH+DKRFAGF D KQLD+D+HRKYIYGGHVA YM ++ E+EP+ + +HF+EY+KKGIDADG+ ALYKKV AAI A PT Sbjct: 32 RARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPT 252
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 362.844 bits (930), Expect = 9.159e-100 Identity = 175/223 (78.48%), Postives = 197/223 (88.34%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTRK 678 RARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL + LTNYAAAYCTGLLLARRVLKMLEMDDEY+GNVEATGED+SVEPTD+RRPFRALLDVGLI+TTTGNRVFGALKGALDGGL IPH+DKRFAGF + KQLDA++HR YIYGGHV+ YM L EDEP+ +HF+ YIKKG++A+ + +YKKV AAI A P K Sbjct: 31 RARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHK 253
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 362.459 bits (929), Expect = 1.196e-99 Identity = 176/223 (78.92%), Postives = 197/223 (88.34%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTRK 678 RARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL + LTNYAAAYCTGLLLARRVLKMLEMDDEY+GNVEATGED+SVEPTD+RRPFRALLDVGLI+TTTGNRVFGALKGALDGGL IPH+DKRFAGF + KQLDA++HR YIYGGHV+ YM L EDEP+ +HF+ YIKKG++A+ + LYKKV AAI A P K Sbjct: 31 RARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPK 253
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.369e-95 Identity = 171/221 (77.38%), Postives = 191/221 (86.43%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPT 672 RARIRL NQDKNKYNTPKYRFV TNKDI AQIV A I GD V+AAAY+HELPRYGLE+ LTNYAAAYCTGLLLARRVL + +D EY+GNVEATGEDY VEP D RRPFRALLDVGLI+TTTGNRVFGALKGALDGGL IPH+DKRFAGF D KQLD+D+HRKYIYGGHVA YM ++ E+EP+ + +HF+EY+KKGIDADG+ +LYKKV AAI A PT Sbjct: 35 RARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPT 252
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 4.737e-72 Identity = 131/224 (58.48%), Postives = 166/224 (74.11%), Query Frame = 1 Query: 10 RARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPT-DTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTRK 678 RAR RL+ QDKNKYNTPKYR V+RFTN DII QI+ A I GD VL +AYAHELPRYG+++ LTNYAAAYCTGLLLARR+L L + D+Y G + GED++VE D RPFRA LDVGL +TTTGNRVF A+KGA+DGG+ IPH+ RF G+ + QL+AD R+YI+GGHV+ YM L E++ + Y +HF+ +IK+GI AD + +Y+ A I A P + Sbjct: 31 RARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESSQLEADKLRQYIFGGHVSDYMKYLQEEDEEKYKAHFSRFIKEGITADSMEQMYRDAHAKIRANPAHE 254
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 8.933e-71 Identity = 130/223 (58.30%), Postives = 167/223 (74.89%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPT-DTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTRK 678 AR RLI QDKNKYNTPKYR VVRF+N+DI Q+ + I GD +L AAYAHELP+YG+++ LTNYAAAYCTGLLLAR++L L +D Y G+ E TGE+++V+P D FR LDVGL++TTTG RVFGA+KGA+DGGL I H+ KRF GF ++ K+ +ADVHR++I+G HVA YM L E++ + Y F++YIK G++AD + LYKK AI A P RK Sbjct: 32 ARKRLIAQDKNKYNTPKYRLVVRFSNRDITCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARK 254
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.167e-70 Identity = 127/222 (57.21%), Postives = 164/222 (73.87%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTRR-PFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTR 675 AR RL QDK+KYNTPKYR +VR +NKDI QI + I GD ++ AAY+HELP+YG+++ LTNYAAAYCTGLLLARR+LK L++D Y G E G++Y+VE D FR LD GL++TTTG R+FGA+KGA+DGGL IPH+ KRF G+ N+ K +ADVHR++I+ H+A YM TL E+EP+N+ F++YIK GI ADG+ +YKK AI A P R Sbjct: 32 ARKRLTVQDKSKYNTPKYRLIVRLSNKDITCQIAYSRIEGDRIVCAAYSHELPKYGIKVGLTNYAAAYCTGLLLARRLLKQLKLDTLYTGTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDR 253
BLAST of FC876576 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 9.876e-70 Identity = 128/223 (57.40%), Postives = 163/223 (73.09%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEISLTNYAAAYCTGLLLARRVLKMLEMDDEYDGNVEATGEDYSVEPTDTR-RPFRALLDVGLIKTTTGNRVFGALKGALDGGLYIPHTDKRFAGFSNDGKQLDADVHRKYIYGGHVAAYMSTLMEDEPDNYHSHFTEYIKKGIDADGL*ALYKKVQAAIHAYPTRK 678 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG+++ LTNYAAAYCTGLLLARR+L +D Y+G VE TG++Y+VE D + F LD GL +TTTGN+VFGALKGA+DGGL IPH+ KRF G+ ++ K+ +A+VHRK+I G +VA YM LME++ D Y F++YIK I DG+ +YKK AAI P + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHE 254 The following BLAST results are available for this feature:
BLAST of FC876576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876576 ID=FC876576; Name=FC876576; organism=Citrus clementina; type=EST; length=679bpback to top |