FC876581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 6.718e-92 Identity = 162/202 (80.20%), Postives = 172/202 (85.15%), Query Frame = 2 Query: 65 MPPKQQ--SKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+ SKA+LAKKQK+VEDKTFGLKNKNKSKNVQKYVQ+L Q VQPKPD +K LNDLFK+AVSQPKVPVGVDPKSI+CEF+K GQCQKGFKCKFSHDLNVQRKGEKIDIY+DKRD ETMEDWDQETLEKVV SK EYQQNKPTDIVCKYFL+AVEKKQYGWFWVCPNGGKD HYRHAL PG V Sbjct: 1 MPPKKAAPSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLHQAVQPKPDPTKTAAKKKKEEEKAREKELNDLFKVAVSQPKVPVGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIYTDKRDAETMEDWDQETLEKVVASKGAEYQQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKDCHYRHALPPGYV 202
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 3.686e-90 Identity = 157/201 (78.11%), Postives = 172/201 (85.57%), Query Frame = 2 Query: 65 MPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKE-TMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPKQQ KA+LAKKQK VEDKTFGLKNKNKSKNVQKYVQ+LKQ+VQPKPD +K LN+LFK+A+SQPKVPVGVDPKSILCEF+KAGQCQKGFKCKFSHDLN+QRKGEKIDIYSD RD++ M++WDQETLEKVVESK EY QNKPTDIVCKYFL+AVEKKQYGWFW CPNGGK+ HYRHAL PG V Sbjct: 1 MPPKQQPKADLAKKQKQVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDATKAAAKKKKEEEKAREQELNELFKVAISQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDTRDEDGDMDEWDQETLEKVVESKKNEYNQNKPTDIVCKYFLDAVEKKQYGWFWSCPNGGKECHYRHALPPGYV 201
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_RAT (Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.674e-50 Identity = 106/217 (48.85%), Postives = 139/217 (64.06%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLEA+E +YGWFWVCP GG + YRHAL PG V Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFV 216
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_MOUSE (Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.674e-50 Identity = 106/217 (48.85%), Postives = 139/217 (64.06%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLEA+E +YGWFWVCP GG + YRHAL PG V Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFV 216
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_HUMAN (Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.186e-50 Identity = 107/217 (49.31%), Postives = 138/217 (63.59%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG YRHAL PG V Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFV 216
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_BOVIN (Zinc finger CCCH domain-containing protein 15 OS=Bos taurus GN=ZC3H15 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.186e-50 Identity = 107/217 (49.31%), Postives = 138/217 (63.59%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG YRHAL PG V Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFV 216
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENTR (Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.729e-50 Identity = 106/209 (50.72%), Postives = 134/209 (64.11%), Query Frame = 2 Query: 71 PKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 P+ K E KK+KI+EDKTFGLKNK +K QK+++N+ V Q P Q++ LNDLFK V+ KV G DPKS++C FYK GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG YRHAL PG V Sbjct: 10 PQSGKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVIHQVKFGQQNPRLVAQAEGEKKTKKDDKKKELLELNDLFKPVVAAQKVSKGADPKSVVCAFYKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDEELEKDTMENWDEKKLEEVVNKKHGEAEKIKPKTQIVCKFFLEAIENNKYGWFWVCPGGGDMCMYRHALPPGFV 217
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.851e-49 Identity = 105/217 (48.39%), Postives = 138/217 (63.59%), Query Frame = 2 Query: 65 MPPKQQS-------KAELAKKQKIVEDKTFGLKNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+Q KA+ KK+KI+EDKTFGLKNK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCKYFL+A+E +YGWFWVCP GG + YRHAL PG V Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEDLEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPPGFV 217
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENLA (Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.385e-49 Identity = 104/209 (49.76%), Postives = 132/209 (63.16%), Query Frame = 2 Query: 71 PKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNK-PTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 P+ K E KK+KI+EDKTFGLKNK +K QK+++N+ V Q P Q++ LNDLFK V KV G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ K T IVCK+FLEA+E +YGWFWVCP GG YRHAL PG V Sbjct: 10 PQASKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVTHQVKSGQQNPRLVAQAEGDKKNKKDDKMKELQELNDLFKPVVVAQKVSKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDDELEKDTMENWDEKKLEEVVNKKHGEAEKIKAKTQIVCKFFLEAIENNKYGWFWVCPGGGDTCMYRHALPPGFV 217
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.200e-48 Identity = 103/207 (49.76%), Postives = 130/207 (62.80%), Query Frame = 2 Query: 65 MPPKQ-QSKAELAK-KQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV-----QPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAG-QCQKGFKCKFSHDLNVQRKGEKIDIYSDKR-DKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPG 658 MPPKQ QSK + K K+K VEDKTFGLKNKNKSK V YV ++ V Q K K + + Q KVP+GVDPKSI+CE++K G C KG +CKF+HDL RK EKIDIY+D+R D++TME+WD+ L+ VVE K + KPT I+CK+FL+A+E K+YGWFW CPNGG+ Y+H L G Sbjct: 1 MPPKQAQSKKTVEKEKKKKVEDKTFGLKNKNKSKKVAAYVSQVEAQVKHSGLQNKEAALKEKAKRDKELAEKAKKEAESILVNTIVQSKVPLGVDPKSIVCEYFKQGVTCPKGNRCKFAHDLAAGRKSEKIDIYTDRRKDEDTMENWDEAKLKSVVEKKRTTENKAKPTAIICKFFLDAIESKKYGWFWECPNGGEKCAYQHCLPEG 207 The following BLAST results are available for this feature:
BLAST of FC876581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876581 ID=FC876581; Name=FC876581; organism=Citrus clementina; type=EST; length=664bpback to top |