FC876643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYK_ORYSJ (Lysyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.622e-15 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQF NEGIDL Sbjct: 318 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDL 356
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYK_ARATH (Lysyl-tRNA synthetase OS=Arabidopsis thaliana GN=At3g11710 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.774e-13 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 +MRLYMRIAPELYLK+L+VGGL+RVYEIGKQF NEGIDL Sbjct: 327 DMRLYMRIAPELYLKQLIVGGLERVYEIGKQFRNEGIDL 365
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYKC_YEAST (Lysyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=KRS1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.922e-12 Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 +M +YMRIAPEL+LK+LVVGGLDRVYEIG+QF NEGID+ Sbjct: 294 DMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDM 332
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYKC_SCHPO (Lysyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=krs1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 +M LYMRIAPELYLK LVVGGLDRVYEIG+QF NEG DL Sbjct: 295 DMDLYMRIAPELYLKMLVVGGLDRVYEIGRQFRNEGADL 333
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYKC_ENCCU (Probable lysyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU04_0580 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.522e-11 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1 Query: 10 LYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 LYMR++PELYLK+LVVGGL+RVYEIGKQF NEGIDL Sbjct: 157 LYMRVSPELYLKKLVVGGLERVYEIGKQFRNEGIDL 192
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYK_MOUSE (Lysyl-tRNA synthetase OS=Mus musculus GN=Kars PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.988e-11 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 +M LYMRIAPELY K LVVGG+DRVYEIG+QF NEGIDL Sbjct: 289 DMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDL 327
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYK_HUMAN (Lysyl-tRNA synthetase OS=Homo sapiens GN=KARS PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 1.988e-11 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 +M LYMRIAPELY K LVVGG+DRVYEIG+QF NEGIDL Sbjct: 291 DMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDL 329
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYK_CRIGR (Lysyl-tRNA synthetase OS=Cricetulus griseus GN=KARS PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.988e-11 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 1 NMRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 +M LYMRIAPELY K LVVGG+DRVYEIG+QF NEGIDL Sbjct: 291 DMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDL 329
BLAST of FC876643 vs. ExPASy Swiss-Prot
Match: SYKC_NOSCE (Probable lysyl-tRNA synthetase, cytoplasmic OS=Nosema ceranae (strain BRL01) GN=NCER_100909 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.428e-11 Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 1 Query: 4 MRLYMRIAPELYLKELVVGGLDRVYEIGKQFXNEGIDL 117 M L++RIAPELYLK+LV+GG+DRVYEIGK F NEGIDL Sbjct: 226 MNLFLRIAPELYLKKLVIGGMDRVYEIGKLFRNEGIDL 263 The following BLAST results are available for this feature:
BLAST of FC876643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876643 ID=FC876643; Name=FC876643; organism=Citrus clementina; type=EST; length=118bpback to top |