FC876688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 5.137e-95 Identity = 170/269 (63.20%), Postives = 203/269 (75.46%), Query Frame = 3 Query: 15 STFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLNDSNETFKDLTSKSYPFAFMLTSAGYLLTMFGDCIIDFVIKQG-----------SKKKTIVDVEEEKSEEV--GTDGNPVFFRTSSIGDTILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIA*GFKPQNKCYFDAPFFKFLAVLSG 782 STF GVSPYFYRWNESFLLLGTQF+GG+FL T+++HFL+D+NETF+ L K YP+AFML +AGY LTM D + FV S++ V V+EE E+ G D + RTS GDT LLI ALCFHS FEGIAIG+S TK +AW+NLWTISLHK+FAA+AMGIALL++IPKRPF LT YSFAF ISSPIGVGIGI I+AT+QG DW YAISMGLACGVF+YVA+NHLI+ G+KP+ +CYFD P +KF+AV G Sbjct: 74 STFLAGVSPYFYRWNESFLLLGTQFSGGIFLATALIHFLSDANETFRGLKHKEYPYAFMLAAAGYCLTMLADVAVAFVAAGSNNNHVGASVGESREDDDVAVKEEGRREIKSGVDVSQALIRTSGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLG 342
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.550e-83 Identity = 154/265 (58.11%), Postives = 193/265 (72.83%), Query Frame = 3 Query: 12 VSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLNDSNETFKDLT--------SKSYPFAFMLTSAGYLLTMFGDCIIDFVIKQGSKKKTIVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIA*GFKPQNKCYFDAPFFKFLAVLSG 782 V TF GVSPYF +W++ FL+LGTQFAGGVFL T++MHFL+D++ETF+ L S +YPFA+ML AG++LTM D +I + + + ++ T+ +SIGD+ILLI+ALCFHS FEGIAIG+S TK +AW+ LWTI+LHKIFAAIAMGIALLRMIP RP + YSFAFAISSPIGV IGI IDATTQG IADWI+A+SM LACGVF+YV++NHL+A G++P K + D P +KFLAVL G Sbjct: 58 VLTFISGVSPYFLKWSQGFLVLGTQFAGGVFLATALMHFLSDADETFRGLLTAEGESEPSPAYPFAYMLACAGFMLTMLADSVIAHIYSKTQNDLELQGEDKSNQRSATTE--------TSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFG 314
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: S39A1_DANRE (Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.885e-13 Identity = 63/250 (25.20%), Postives = 103/250 (41.20%), Query Frame = 3 Query: 87 FAGGVFLGTSMMHFLND-----SNETFKDLTSKSYPFAFMLTSAGYLLTMFGDCIIDFVIKQGSKKKTIVDVEEEKSEEVGTDGNP-------------VFFRTSSIGDTILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIA*GFKPQNKCYFDAPFFKFLAVLSG 782 FAGGVFL ++ + D E K +P + + G+ + + ++ +G + + + + G+P V F S + +L L+L HS FEG+AIG+ T + + I +HK ++ + L++ K L Y FAI SP+G+GIGI + T+ I A+ GLA G FIY+ ++ P + P K L +L G Sbjct: 51 FAGGVFLSACLLDIIPDYLSDIHGELQKRDLDDGFPLPEFIMACGFFTVLILEKMV-LSCTEGHRNEETAPLLAPAAPNGHAHGHPSVNDLEGSGHHVHVDFHAHSSFRSFMLFLSLSLHSVFEGLAIGLQTTNAKVLEICIAILVHKSIIVFSLSVKLVQSAVKP--LWVVLYVTVFAIMSPLGIGIGIVV-IETERQAGGLIQAVLEGLAAGTFIYITFLEIL-----PHELNSSERPLLKVLFLLCG 291
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: S39A1_TAKRU (Zinc transporter ZIP1 OS=Takifugu rubripes GN=slc39a1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12 Identity = 61/234 (26.07%), Postives = 104/234 (44.44%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLND-----SNETFKDLTSKSYPFAFMLTSAGYLLTMFGDCIIDFV--IKQGSKKKTIVDVEEEKSEEVGTDGNP----------VFFRTSSIGDTILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLI 707 + + L L + FAGGVFL + + D + E S+P + +AG+ + + I+ ++ +++T + E + G P V F+ S + +L L+L HS FEG+AIG+ T + + I +HK ++ + L++ P L AAY FA+ SP+G+ IGI++ Q I AI G A G F+Y+ ++ Sbjct: 41 HRTVLSLISCFAGGVFLSACFLDIIPDYLSDINTELHARQLETSFPLPEFIMAAGFFTVLILERIVLNCKEMRATHEERTTLIPERKSGHGHGHGDGPDPESSGHHVHVDFQAHSPFRSFMLFLSLSLHSIFEGLAIGLQTTDPKVVEICIAILVHKSIIVFSLAVKLVQ--SAIPPLWVAAYIGVFALMSPVGIAIGISV-MEAQLAAGPLIQAILEGFAAGTFVYITFLEIL 271
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: ZNTD_DICDI (Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 330 VFFRTSSIGDTILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRP-FLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLI 707 V + S+I +L++AL HS FEG+A+GV +++ + L I HKI A+ A+GI+ + ++P FL F F+++SPIG +G+ I G + I G+A G F+YVA+ +I Sbjct: 527 VVTKKSNILLPFILVIALSIHSLFEGLAMGVQSSEIRVFDILIAIFAHKILASFALGISTITSSNEKPSFLKLFLLVFVFSLTSPIGSILGMVI--VGSGVTGSMVPPILQGIASGTFLYVAVVEII 651
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: S39A1_HUMAN (Zinc transporter ZIP1 OS=Homo sapiens GN=SLC39A1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 61/257 (23.74%), Postives = 112/257 (43.58%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLNDSNETFKDLTSK-----SYPFAFMLTSAGYLLTMFGDCIIDFVIKQGSKKKTIVDVEEEKSEEVGT-DGNPVFFR-------------TSSIGDTILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIA*GFKPQNKCYFDAPFFKFLAVLSG 782 L L + FAGGVFL T ++ L D + + +P + + G+ L + + I K+ S + EE +GT +G P + T S +L+ +L HS FEG+A+G+ + A + + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L+G Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVMEQIT-LAYKEQSGPSPL----EETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELASSEQRILKVILLLAG 312
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: S39A1_BOVIN (Zinc transporter ZIP1 OS=Bos taurus GN=SLC39A1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 64/270 (23.70%), Postives = 119/270 (44.07%), Query Frame = 3 Query: 30 GVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLNDS----NETFKDL-TSKSYPFAFMLTSAGYLLTMFGDCIIDFVIKQGSKKKTIVDVEEEKSEEVGT-DGNPVFFR----------TSSIGDTI---LLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIA*GFKPQNKCYFDAPFFKFLAVLSG 782 G +P + L L + FAGGVFL T ++ L D +E L + +P + + G+ L + + I K+++ EE +GT +G P + SS + +L+ +L HS FEG+A+G+ + A + + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L+G Sbjct: 56 GANPEASASRQKALSLVSCFAGGVFLATCLLDLLPDYLGAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPPPREETRALLGTVNGGPQHWHDGLGVPQAGGASSAPSALRACVLVFSLALHSVFEGLAVGLQRDQARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGTAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELATSEQRILKVILLLAG 312
BLAST of FC876688 vs. ExPASy Swiss-Prot
Match: S39A1_MOUSE (Zinc transporter ZIP1 OS=Mus musculus GN=Slc39a1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11 Identity = 63/257 (24.51%), Postives = 114/257 (44.36%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLNDS----NETFKDL-TSKSYPFAFMLTSAGYLLTMFGDCIIDFVIKQGSKKKTIVDVEEEKSEEVGT-DGNPVFFRTS----SIGDT---------ILLILALCFHSFFEGIAIGVSATKGEAWKNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIA*GFKPQNKCYFDAPFFKFLAVLSG 782 L L + FAGGVFL T ++ L D +E + L + +P + + G+ L + + I +Q S EE +GT +G P + G T +L+ +L HS FEG+A+G+ + A + + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L+G Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALEALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSSPPHP-----EETRALLGTVNGGPQHWHDGPGIPQAGGTPAAPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLR--VQVVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELATSEQRILKVILLLAG 312 The following BLAST results are available for this feature:
BLAST of FC876688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876688 ID=FC876688; Name=FC876688; organism=Citrus clementina; type=EST; length=789bpback to top |