FC876691

Overview
NameFC876691
Unique NameFC876691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10382 contig Ccv1_Contig10382:1..630. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.061e-35
Identity = 77/166 (46.39%), Postives = 106/166 (63.86%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V  ++GG+VY+L PTPELWT+ L HRTQILY  DI+ + M LEL PG +V               R++APTGH++T +FH+QRA  ARE+F++  VS +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF 169          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 77/166 (46.39%), Postives = 105/166 (63.25%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V  ++GG+VY+L PTPELWT+ L HRTQILY  DI+ + M LEL PG +V               R+VAPTGH++T +FH+QRA  ARE+F+   +S +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF 169          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V   +GG+VY+L PTPELWTL L HRTQILY  DI+ + M LEL PG +V               R +APTGH++T +FH+QRA  ARE+F+   V  +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF 169          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.001e-34
Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 1
Query:  130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            +++   IKEGD  I+   H  M AV+V + +  Q R G  +HS D IG+PFGS V   +GG+VY+L PTPELWTL L HRTQILY  DI+ + M LEL PG +V               R +APTGH++T +FH+QRA  ARE+F+   V  +VTV  +D+   GF
Sbjct:    4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGF 169          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.342e-30
Identity = 67/163 (41.10%), Postives = 101/163 (61.96%), Query Frame = 1
Query:  142 RCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQG-QGF 624
            + IKEGD V++Y   D M  + +  N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L HRTQIL+  DIS +I  LEL  G                 AR +AP GH++TF+FHE+R   AR+DF+  G+  ++TV  RD  G +GF
Sbjct:    6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRDACGKEGF 168          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.176e-26
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF 624
            IKEGDLV+ +   D +K + V     F  R+GAF HSD IGKPFGS +      SN+ GF+++L PTPELW++ L HRTQI+Y  D S+++  +E  P   V              AR+    GH+++++FHE R   A+++F+  G+  +   T+  RD+   GF
Sbjct:   11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGF 173          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.837e-26
Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTG-VSSFVTVGVRDIQGQGF 624
            IKEGDL +++   D +K V++     F  R+G+F H D IGKP+GS +      SNK  FV++L PTPELWTL L HRTQI+Y  D S+++  L   P   V              AR+V   GH+++F+FH  R   A E+F+  G +   VT+  RD+   GF
Sbjct:   13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGF 174          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 62/163 (38.04%), Postives = 96/163 (58.90%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPD 630
            I+ GD+VI+Y   D M A+ +     F N++G + H   IG+ +GS + S     G+V++L PTPELWTL L HRTQILY+ DIS++ M L +  G  V              +R+V P+G V +F++H QR  +A ++FE  G+++ V +  R++  +GF D
Sbjct:   14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLTN-VRLQHRNVCKEGFGD 175          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            I+EGDLV+ Y     +K + V +   F  R+G F+H   IG  +G  +   KG GF++LL PTPELWTL L HRTQI+Y  D S++I  L + PG  V              AR V  +G V+T++FHE R   A+++ E   + +  T+  RD+   GF
Sbjct:   10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEEHKLDN-TTITHRDVCNDGF 168          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 9.318e-24
Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            I+EGDLV+ +     +K + V + S    R+G F+H   IG  +G  +   KG GF++LL PTPELWT+ L HRTQI+Y  D S++I  L +  G  V              AR +   G ++T++FHE R   A+++ E  G+ +   +  RD+   GF
Sbjct:   10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGF 169          
The following BLAST results are available for this feature:
BLAST of FC876691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TRM61_RAT1.061e-3546.39tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_MOUSE1.810e-3546.39tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_HUMAN2.364e-3546.39tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_BOVIN2.001e-3446.39tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_DICDI1.342e-3041.10tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_KLULA1.176e-2638.55tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_YEAST5.837e-2640.00tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_CRYNE2.897e-2538.04tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_CANAL2.897e-2538.75tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_DEBHA9.318e-2435.63tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AA03RM1 EHR Citrus clementina cDNA clone KN0AAN3AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876691 ID=FC876691; Name=FC876691; organism=Citrus clementina; type=EST; length=630bp
TTCTCTCTGCCTCTCAGATTTTGCTGTCTGACTTCCTGAACCCGTCACAA
TTTTATTTGCAGATAATTGCTTGGTTTTAGTAACTCTTTGATAATTTAAA
GGATGTTGCCAACTGATCCAACGAAAAAGATATCCTTTACTCGATGCATT
AAAGAAGGGGACTTGGTTATTGTCTATGAGAGGCATGACTGCATGAAAGC
TGTTAAAGTATGCCAGAACTCAGCTTTCCAGAACCGTTTTGGTGCGTTTA
AACATTCAGACTGGATTGGGAAGCCCTTTGGGTCTATGGTGTTCAGTAAC
AAGGGCGGATTTGTTTACTTGTTAGCCCCAACTCCGGAGTTATGGACTCT
GGTTTTGAGCCATAGAACTCAGATACTTTACATTGCAGATATTAGCTTTG
TCATCATGTACTTAGAACTTGTTCCTGGTTGTTTGGTTCTGGAGTCAGGG
ACTGGAAGTGGATCTTTGACAACCTCTCTTGCAAGGGCTGTAGCTCCTAC
AGGACATGTCTATACTTTTGATTTTCATGAGCAAAGGGCTGCCTCAGCTA
GGGAAGACTTTGAGAGGACAGGAGTGAGCAGTTTTGTTACTGTGGGTGTT
AGAGATATCCAGGGTCAGGGATTTCCTGAT
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