FC876760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.525e-14 Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 130 DDQWIFWVGPF+GA AA YHQYILRA+AIKALGSFRSNA Sbjct: 239 DDQWIFWVGPFLGALAAAAYHQYILRASAIKALGSFRSNA 278
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.601e-14 Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 130 DDQWI+WVGPF+GA VAA YHQYILR +AIKALGSFRSNA Sbjct: 248 DDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALGSFRSNA 287
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.601e-14 Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 130 DD WIFWVGP +GA +AAFYHQYILRA AIKALGSFRSNA Sbjct: 251 DDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSNA 290
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.397e-14 Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 130 DD WIFWVGP +GA +AAFYHQYILRA AIKALGSFRSNA Sbjct: 253 DDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSNA 292
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.567e-14 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 127 DD WIFWVGPF+GA AA YHQY+LRAAAIKALGSFRSN Sbjct: 241 DDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALGSFRSN 279
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.883e-14 Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 14 DQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 130 + WIFWVGPF+GA +AAFYHQYILRA AIKALGSFRSNA Sbjct: 252 NHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 290
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.291e-13 Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 127 DD WIFW GPFIGA AA YHQYILRAAAIKALGSFRSN Sbjct: 241 DDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSN 279
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.876e-13 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 127 DD WIFWVGPF+GA AA YHQYILRAAAIKAL SFRSN Sbjct: 237 DDHWIFWVGPFVGALAAAAYHQYILRAAAIKALASFRSN 275
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.093e-12 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 124 DDQWIFWVGP IGA AAFYHQ+ILRAAAIKALGSF S Sbjct: 246 DDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283
BLAST of FC876760 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.179e-12 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 2 Query: 11 DDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 130 DD WIFWVGPFIGA +AAFYHQ++LRA+ K+LGSFRS A Sbjct: 244 DDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRSAA 283 The following BLAST results are available for this feature:
BLAST of FC876760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876760 ID=FC876760; Name=FC876760; organism=Citrus clementina; type=EST; length=429bpback to top |