FC876773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.777e-39 Identity = 74/104 (71.15%), Postives = 87/104 (83.65%), Query Frame = 3 Query: 162 LLPGDSSHHGIYKGEPSEFSQDMPKD----GGRWYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKNDRR 461 ++P DSSHHGI + P +Q ++ G WYFSRKE+EE+SPSRRDGIDLK+E+YLRKSYCTFLQDLGM+LKVPQ+TIATAI+FCHRFYLRQSH KNDRR Sbjct: 3 MMPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRR 106
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.401e-36 Identity = 73/107 (68.22%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 153 MANLLPGDSSHHGIYKGEPSEFSQDMPKDGGR----WYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKNDRR 461 M + DSSHHGI + P D +GG+ WYFSRKE+EE+S SRRDGIDLK+E+YLRKSYCTFLQDLGM+LKVPQ+TIATAI+FCHRF+LRQSH KNDRR Sbjct: 1 MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRR 107
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.922e-34 Identity = 69/103 (66.99%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 153 MANLLPGDSSHHGIYKGEPSEFSQDMPKDGGRWYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKNDRR 461 MA +L G+ S+ S S + ++ RWYF RKE+EE+SPSR DGIDLK+ETYLRKSYCTFLQDLGM+LKVPQ+TIATAIIFCHRF+ RQSH KNDRR Sbjct: 1 MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRR 103
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.219e-33 Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 3 Query: 153 MANLLPGDSSHHGIYKGEPSEFSQDMPKDGGRWYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKNDRR 461 MA +L GD S S S + + RWYF RKE+EE+SPSR D IDLK+ETYLRKSYCTFLQDLGM+LKVPQ+TIATAIIFCHRF++RQSH +NDRR Sbjct: 1 MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRR 103
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 3 Query: 249 WYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKNDRR 461 W+FSR+E+E +SPSRRDGIDLK ET LR SYCTFL+ LG +LKVPQ+TIATAI FCHRF+LRQSH KNDR+ Sbjct: 31 WFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKNDRQ 101
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT13_ARATH (Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 48/70 (68.57%), Postives = 60/70 (85.71%), Query Frame = 3 Query: 246 RWYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKND 455 +WYFSR+E+E SPSR+DGIDL +E++LR SYCTFLQ LGMKL V Q+TI+ A++ CHRFY+RQSH KND Sbjct: 33 KWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKND 102
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT11_ORYSJ (Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.253e-21 Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 3 Query: 243 GRWYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKND 455 G WY +R E+E SPSRRDG+ +E LR +YC+F++D+G++L++PQ+TIATA + CHRFYLRQSH KN+ Sbjct: 7 GSWYVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYLRQSHAKNE 77
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT12_ORYSJ (Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19 Identity = 42/68 (61.76%), Postives = 58/68 (85.29%), Query Frame = 3 Query: 249 WYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKN 452 WYF+R+ELE+ SPSR+DGI E+ +R+ YC+F++D+G++LK+PQ+TIATAI+FCHRFYL QS KN Sbjct: 18 WYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKN 85
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCT11_ARATH (Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17 Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 249 WYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTKND 455 WY +R+ +E+ SPSR DGI+LK ET+ R SY +FLQ+LG +L PQ TIATAI+ C RF+ RQS TKND Sbjct: 7 WYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKND 75
BLAST of FC876773 vs. ExPASy Swiss-Prot
Match: CCNT1_PANTR (Cyclin-T1 OS=Pan troglodytes GN=CCNT1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 234 KDGGRWYFSRKELEEDSPSRRDGIDLKRETYLRKSYCTFLQDLGMKLKVPQITIATAIIFCHRFYLRQSHTK 449 K+ RWYF+R++LE +SPSRR G+D +E R+ LQD+G +L V Q+TI TAI++ HRFY+ QS T+ Sbjct: 6 KNNKRWYFTREQLE-NSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQ 76 The following BLAST results are available for this feature:
BLAST of FC876773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876773 ID=FC876773; Name=FC876773; organism=Citrus clementina; type=EST; length=671bpback to top |