FC876783

Overview
NameFC876783
Unique NameFC876783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876783 vs. ExPASy Swiss-Prot
Match: Y3684_ARATH (Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.873e-79
Identity = 149/249 (59.84%), Postives = 180/249 (72.29%), Query Frame = 1
Query:   10 GRDQLLPSEEEGDRLCRALPNCQTRRFXXXXHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEVNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGAKIVPFGVVGENDLAQIVLDYNDQ 756
            GRD  L  EE+ DR  R LP C  R+      F  LEDGVDL T IK   +YRRG+  D+++D+I PTT E+ +  +++R ++D TS VMLSTL DG +VR L G+PSEGPVL VG HM+LG E  PMV   + ERNI +R +AHPM+F N +D  L D   +D ++IMG VPVS  N YKL+  KAHVLLYPGGVREA HRKGEEYKLFWPE SEFVRVA+ FGAKIVPFGVVGE+D+ +IVLD NDQ
Sbjct:  334 GRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCTCFYRRGKSHDHITDYIMPTTFELKQQVDDHRLLMDGTSPVMLSTLEDGTVVRSLEGLPSEGPVLYVGYHMILGFELAPMVIQLMTERNIHLRGLAHPMLFKNLQD-SLVDTKMFDKYKIMGGVPVSHFNIYKLLREKAHVLLYPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKIVPFGVVGEDDICEIVLDSNDQ 581          
BLAST of FC876783 vs. ExPASy Swiss-Prot
Match: Y1457_ARATH (Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.083e-68
Identity = 131/252 (51.98%), Postives = 170/252 (67.46%), Query Frame = 1
Query:   10 GRDQLLPSEEEGDRLCRALPNCQTRRFXXXXHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEVNKVYEEYR-WMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTY-DTFRIMGSVPVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGAKIVPFGVVGENDLAQIVLDYNDQM 759
            G+D +LPS+EE  RL   L NC  R F    H L LED + L+T IKG G YRR    D VSDF+PP+  E+    +E   ++ +   SV  ST+ DGKIV+GL+G+P +GPVLLVG HML+GLE  PM   F+ E+NIL R +AHP+++    D        Y D  ++ G+ PV+A N +KL+ SK+HVLL+PGG REA H +GE+YKL WPE  EFVR+AA FGA IVPFG VGE+D+A++VLDYND M
Sbjct:  335 GKDMMLPSQEEAKRLHGLLKNCSVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLGFLRNAVGSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSEAFIKEKNILFRGMAHPVLY---SDNDPAKAFDYGDWIKVFGAYPVTATNLFKLLDSKSHVLLFPGGAREALHNRGEQYKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLM 583          
The following BLAST results are available for this feature:
BLAST of FC876783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3684_ARATH2.873e-7959.84Acyltransferase-like protein At3g26840, chloroplas... [more]
Y1457_ARATH5.083e-6851.98Acyltransferase-like protein At1g54570, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN3AG03RM1 EHR Citrus clementina cDNA clone KN0AAN3AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876783 ID=FC876783; Name=FC876783; organism=Citrus clementina; type=EST; length=759bp
GCACGAGGTGGAAGGGATCAGTTACTGCCAAGTGAGGAGGAAGGTGACAG
ACTTTGCCGTGCTCTACCCAACTGTCAGACTCGTAGGTTTGGTGGCGGAG
GTCATTTTCTGTTTTTGGAAGATGGTGTTGATTTGGTAACCACAATCAAG
GGTGCTGGTTACTATCGCCGGGGAAGAATAGTTGACTATGTTTCAGATTT
CATACCGCCAACTACTATCGAAGTGAATAAAGTATATGAAGAATACAGAT
GGATGGTTGATCTTACTAGCTCTGTGATGCTATCAACTTTACCGGATGGG
AAGATTGTGAGGGGTCTCTCTGGAATACCATCTGAGGGACCAGTCTTGTT
AGTTGGAAATCATATGTTGTTGGGACTTGAAGCGCTTCCAATGGTACCGA
CATTCGTGATCGAGAGAAATATTCTTGTTCGAGCCATTGCACATCCAATG
GTGTTCTTTAATGCAAAAGATGGAGGATTACCTGACTTAGTAACATATGA
TACATTTAGAATTATGGGCTCTGTTCCAGTCTCTGCAATAAATTTCTATA
AACTTGTGTCTTCAAAGGCTCATGTCCTGCTTTACCCTGGTGGAGTACGA
GAAGCTTTTCATCGTAAGGGTGAAGAATATAAGTTATTCTGGCCAGAAAG
TTCCGAGTTTGTCAGGGTGGCAGCTGCATTCGGAGCCAAAATTGTACCTT
TTGGTGTTGTTGGAGAAAACGATCTTGCTCAAATAGTTTTGGATTACAAT
GACCAAATG
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