FC876795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 2 Query: 368 SSGEDGLDEVASDKLQHEPGPVSETRALQSDQEVSTLILSRKSLMLPDTGHLLPSDQERSISSITSEKASQTTDIIPAL--QTGQEVSTPTIREKVSEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 S+ +D+V + + E PV+ TR + + + ++P H + S E ++S SEKA + ++ AL Q+G E ++P IREKV EDGYNWRKYGQKLV+GNEFVRSYY+CTHP C AKKQL+ Sbjct: 17 SNETKAVDDVVATTDKAEVIPVAVTRTETVVESLESTDCKELEKLVP---HTVASQSEVDVASPVSEKAPKVSESSGALSLQSGSEGNSPFIREKVMEDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLE 148
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.629e-13 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 527 PSDQERSISSITSEKASQTTDIIPALQTGQEVSTPTIREKVSEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 P Q R+ TS+ +T++I + S P +K ++DGYNWRKYGQK V+G++F RSYYKCTHP C KK+++ Sbjct: 212 PRSQIRASVQETSQGQRETSEI----SVFEHRSQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTHPACPVKKKVE 287
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 560 TSEKASQTTDIIPALQTGQEVSTPTIREKVSEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKK 757 TS +D ++QT Q S + +++DGYNWRKYGQK V+G+EF RSYYKCTHP C KK Sbjct: 180 TSSDIPAGSDQEESIQTSQNDSRGSTPSILADDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKK 245
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 28/39 (71.79%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 650 SEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 ++DGYNWRKYGQKLV+G+E+ RSYYKCTHP C AKK+++ Sbjct: 177 ADDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEAKKKVE 215
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 452 QSDQEVSTLILSRKSLMLPDTGHLLPSDQERSISSITSEKASQTTDIIPALQTGQEVST-------PTIREKVSEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 Q+ +V+ + + M P T + PS Q +S SS + T+ +PA + +V+ P +K ++DGYNWRKYGQK V+G+EF RSYYKCT+P C KK+++ Sbjct: 158 QALAQVTAQAVQANANMQPQTEYPPPS-QVQSFSS--GQAQIPTSAPLPAQRETSDVTIIEHRSQQPLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVE 266
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 542 RSISSITSEKASQTTDIIPALQTGQEVSTPTIREKVSEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 +S+S T +P+ T E ST ++ S DGYNWRKYGQK V+G+E RSYYKCTHP+C KK+++ Sbjct: 132 KSVSQGTHRAGPNLVQKVPSF-TESETSTG---DRSSVDGYNWRKYGQKQVKGSECPRSYYKCTHPKCPVKKKVE 202
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 2 Query: 650 SEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 +EDGYNWRKYGQKLV+G+E+ RSYYKCT+P C KK+++ Sbjct: 272 AEDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVE 310
BLAST of FC876795 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 2 Query: 644 KVSEDGYNWRKYGQKLVRGNEFVRSYYKCTHPRCLAKKQLD 766 K S+DGYNWRKYGQK V+G+E RSY+KCT+P CL KK+++ Sbjct: 114 KTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVE 154 The following BLAST results are available for this feature:
BLAST of FC876795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876795 ID=FC876795; Name=FC876795; organism=Citrus clementina; type=EST; length=768bpback to top |