FC876803

Overview
NameFC876803
Unique NameFC876803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length499
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.018e-22
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            GDGG G+IKK  F EG+ +   K  V  +DK+N  YS T  EG+ ++++  I++++Y+ K+V +PDGGS       ++ K   EIKEEQVK G EK  G+FK +EA+ LANP+A
Sbjct:   47 GDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSDV--IENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.578e-21
Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            GDGGPG+IKK  F EG+ +   K  + S+DKEN  YS T  EG+ + +  T++ +SYE+K+V +P GGS       ++ K   EIKEE VK G EK   +FK +E +   +P+A
Sbjct:   47 GDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEGDALGD--TLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            GDGGPG+IKK  F EG+ +   K  + S+D+ N  Y+ T  EG+ + +  TI+ VSYE+K+V +   GS    +  ++ K   EIKEE VK G EK  G+FK +E++   +P+A
Sbjct:   47 GDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLIEGDALTD--TIEKVSYETKLVAS-GSGSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.892e-17
Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            G+GG G+IKK  FVEG +       V  +D  N  Y+ +   G G+ +  T++ +S+ESK+   PDGGS + +  K++ K  A   EE++KGG  +  G+FKALE + LANP+
Sbjct:   46 GNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.523e-16
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K  V S+D+ +  Y+ T  EG+ + +  TI+ +SYE+K+V +   GS    +  ++ K   EIKEE VK G EK  G+FK +E++   +P+A
Sbjct:   47 GNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLIEGDALTD--TIEKISYEAKLVAS-GSGSTIKSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.303e-16
Identity = 45/114 (39.47%), Postives = 69/114 (60.53%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K  + S+D+ +  YS T  EG+ + +  TI+ +SYE+K+V     GS    +  ++ K   EIKEE VK G EK  G+FK +E++   +P+A
Sbjct:   47 GNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLIEGDALTD--TIEKISYETKLVAC-GSGSTIKSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 9.586e-16
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K+ V  +D+ N  YS +  EG  V +   ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ KA+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGD--ALEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1L_BETVE (Major pollen allergen Bet v 1-L OS=Betula verrucosa GN=BETV1L PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.635e-15
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK NF EG  +   K  V  +D  N  Y+ +  EG  V +  T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD--TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.635e-15
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK NF EG  +   K  V  +D  N  Y+ +  EG  V +  T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD--TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.635e-15
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK NF EG  +   K  V  +D  N  Y+ +  EG  V +  T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD--TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of FC876803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
PRU1_PRUAR4.018e-2245.61Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV7.578e-2142.98Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
MAL12_MALDO1.747e-1741.23Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
PR1_MEDSA3.892e-1739.82Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
PYRC1_PYRCO2.523e-1639.47Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
MAL11_MALDO4.303e-1639.47Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
MPAG1_ALNGL9.586e-1640.35Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1L_BETVE1.635e-1538.60Major pollen allergen Bet v 1-L OS=Betula verrucos... [more]
BEV1G_BETVE1.635e-1538.60Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]
BEV1D_BETVE1.635e-1538.60Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CA02RM1 EHR Citrus clementina cDNA clone KN0AAN1CA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876803 ID=FC876803; Name=FC876803; organism=Citrus clementina; type=EST; length=499bp
TTTTTTTTTTTTATTTAGCCAAAAGCCAATTATATAAATTGGCATATTTG
AAAACAAAGAAACACGACATACGGAAGCCATAAACAAGATTATTCATAAT
GTTGCAACAAAGGCGACGCAAGTGCGGGGAAGTGTTGACGTAAGAGCTTA
TACGGCATTGGGGTTTGCCAAGGCAAAGGCTTCCAAAGCCTTAAAAATTC
CCTTCTCCTTTTCCAAGCCTCCCTTAACCTGCTCTTCCTTAATCTCGGCA
CCTGGTTTGGGATAGAACTTGAAAACAACGGGGCTCTTGCTTCCTCCGTC
AGGGGTGCCCACAACCTTACTCTCATAAGAAACATGATCAATAGTAGGGA
TGTTAGCAACACCCTCACCTTCAAATGCCGTGGAACTGTATATCTTGTTC
TCTTTGTCCAAAGAACCCACCATCTGCTTAAAGCAATTCCAATCAGCACC
TTCGACAAAATTAAACTTCTTGATGCTACCAGGGCCTCCATCCCCTGAA
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