FC876843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876843 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 90/158 (56.96%), Postives = 109/158 (68.99%), Query Frame = 1 Query: 94 MAAKSQIVTGF-TMPMTPAPXXXXXXXXXXLCMVKKPLTTSFFNGG-VGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLLKMRHATAQMLASHKRLQNK*KSAEQASEDWYRKSHLALQK 561 M K QI +G + P+ P+ ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPEKILEQA+LEMNDDL KMR ATAQ+LAS KRL+NK K+A+QASE+WYRK+ LALQK Sbjct: 1 MTTKFQIFSGLPSAPLQPSSS-----------LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQK 141
BLAST of FC876843 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.112e-35 Identity = 84/157 (53.50%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLLKMRHATAQMLASHKRLQNK*KSAEQASEDWYRKSHLALQK 561 MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A +R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ ++EMN DL KMR ATAQ+LAS K+LQNK K+A+Q+S+DWY+++ LAL K Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAK 152
BLAST of FC876843 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.349e-32 Identity = 75/120 (62.50%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLLKMRHATAQMLASHKRLQNK*KSAEQASEDWYRKSHLALQK 561 L TSF NG V +L++ ++R + +R C R NL DR +RVVKSYANA+LSSFEDPEKIL+QA+LEMNDDL KMR ATAQ+LAS KRL+NK K+AEQAS+DWYR++ LALQK Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQK 138
BLAST of FC876843 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLLKMRHATAQMLASHKRLQNK*KSAEQASEDWYRKSHLAL 555 M LFDRL RVV++ N ++S EDPEK+LEQA+++M +DL+++R A A+ +A KR + + Q ++ W ++ LAL Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLAL 79 The following BLAST results are available for this feature:
BLAST of FC876843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876843 ID=FC876843; Name=FC876843; organism=Citrus clementina; type=EST; length=564bpback to top |