FC876872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876872 vs. ExPASy Swiss-Prot
Match: BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana GN=BHLH147 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35 Identity = 84/159 (52.83%), Postives = 101/159 (63.52%), Query Frame = 2 Query: 227 QWKSETQQQIYSSKLIQALNHV-------NGASPSAPRRGRAVREAADRVLAVAAKGRTRWSRAILTXXXXXXXXXXXXVNRVXXXXXXXXXXXXXXXXXXXFSVLRLKAKSLPAVQRKVRVLGRLVPGCRKQPFPVILEEATDYIAALEMQVRAMTAL 682 +W+SE QQQIYS+KL+ AL + + +S S PR GRAVRE ADR LAVAA+G+T WSRAIL+ R+ +VLRLKAK LPAVQRKV+VL RLVPGCRKQ PV+LEE TDYIAA+EMQ+R MTA+ Sbjct: 49 KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKR-QRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
BLAST of FC876872 vs. ExPASy Swiss-Prot
Match: BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana GN=BHLH148 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 85/163 (52.15%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 227 QWKSETQQQIYSSKLIQALNHVN-------GASPSAPRRGRAVREAADRVLAVAAKGRTRWSRAILTXXXXXXXXXXXX--VNRVXXXXXXXXXXXXXXXXXXXFSVLRLKAKSLPAVQRKVRVLGRLVPGCRKQPFPVILEEATDYIAALEMQVRAMTALAE 688 +W+SE QQ+IYS+KL QAL V +SP+A +RG+AVREAADR LAV+A+GRT WSRAIL SVLRL KS+P V RKVRVLGRLVPGC KQ PVILEEATDYI ALEMQVRAM +L + Sbjct: 47 RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQ 209
BLAST of FC876872 vs. ExPASy Swiss-Prot
Match: BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 70/163 (42.94%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 227 QWKSETQQQIYSSKLIQALNHVNGASPSAPRR---------GRAVREAADRVLAVAAKGRTRWSRAILTXXXXXXXXXXXXVNRVXXXXXXXXXXXXXXXXXXXFSVLRLKAKSLPAVQRKVRVLGRLVPGCRKQPFPVILEEATDYIAALEMQVRAMTALAE 688 +WK+ QQIY+ KL++AL V S + R +R+ ADRVLA +A+G TRWSRAIL + R+K LPAV+RK+++LGRLVPGCRK P +L+EATDYIAALEMQVRAM ALAE Sbjct: 43 RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETN---------RIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAE 193
BLAST of FC876872 vs. ExPASy Swiss-Prot
Match: BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana GN=BHLH150 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20 Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 227 QWKSETQQQIYSSKLIQALNHVNGASPSAPRRGRAVREAADRVLAVAAKGRTRWSRAILTXXXXXXXXXXXXVNRVXXXXXXXXXXXXXXXXXXXFSVLRLKAKSLPAVQRKVRVLGRLVPGCRKQPFPVILEEATDYIAALEMQVRAMTALAE 688 +W++ T Q++YS KL AL RR VR+ AD+VLA A+G TRWSRAIL + + L AV +VRVLG LVPGCR+ P +L+E DYIAALEMQVRAMTAL++ Sbjct: 62 RWRATTAQKVYSLKLYDALQR--------SRRSATVRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSG-----------RRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSK 196 The following BLAST results are available for this feature:
BLAST of FC876872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876872 ID=FC876872; Name=FC876872; organism=Citrus clementina; type=EST; length=688bpback to top |