FC876886
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876886 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43 Identity = 78/166 (46.99%), Postives = 120/166 (72.29%), Query Frame = -2 Query: 269 IVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMS 751 I Y + GLH G+ H+ +FVL L+A + +VESLMM +AS+VPN+L GII GAGIQG+ +L GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+ GL FD+ + GE VL + +Q+ + SKW++L+++ M++ YR++F ++KT E + P V+ +++ Sbjct: 498 ICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIYRIIFFIMIKTNEDVTPWVRGYIA 663
BLAST of FC876886 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 9.466e-35 Identity = 73/178 (41.01%), Postives = 118/178 (66.29%), Query Frame = -2 Query: 236 IVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 751 I Y+L G+ H+ +F L +F + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++ GFFRL DLP FW+YP+ YI++ +A QG +KN+F GL+F + + GE+V+ + +++ YSKW DLA + ++V YRL+F ++K E+ P +KA + KRT + ++ Sbjct: 476 ITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAILVCYRLLFFVVLKLRERAGPALKA---IQAKRTMRNLD 650
BLAST of FC876886 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.597e-34 Identity = 72/178 (40.45%), Postives = 118/178 (66.29%), Query Frame = -2 Query: 236 IVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 751 I Y++ G H+ +F L +F + ++ESLMM+VASLVPN+L G+ITGAGI G++++ GFFRL DLP FW+YP+ ++++ +A QG +KN+F GL+FD + GEQV+ + +Q+ +SKW DL+ + ++V YR++F ++K E+ +P +KA + KRT + ++ Sbjct: 477 ITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKA---IQAKRTMKSLK 651
BLAST of FC876886 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.950e-28 Identity = 63/152 (41.45%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 284 GYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVV 721 G HF Y L L + VES MM++AS+VPN+L G++ GAG G+M+L GFFR DLP FW+YP+ YI + +A QG +KNE G+++D+ + GE +L+ + SKW+DLA++ +++ YR+ F I+K EK+ PV+ Sbjct: 481 GGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLAVVMMILIGYRIAFFAILKFREKVFPVI 632
BLAST of FC876886 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.614e-18 Identity = 47/146 (32.19%), Postives = 78/146 (53.42%), Query Frame = -2 Query: 329 IVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD----NNLDGEQVLRDNWQLQMG-YSKWVDLAILFGMVVFYRLV 751 + Y + GL + YFVL F C+L+ E LM+ +A + + +T + +M+L G FR+ LP P W YP YI+FH Y+ +G+ +NE+ G F ++ G Q ++ N+Q+ +KW ++ +L M YRL+ Sbjct: 528 VFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRLL 673
BLAST of FC876886 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11 Identity = 40/153 (26.14%), Postives = 85/153 (55.56%), Query Frame = -2 Query: 314 VYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIV 748 VY + GL+ Q F++FVL ++ +L+ SL++ ++++ P++++G + G L G+F +P P W + +YY++ ++Y + M NE+ ++ F + + GE VL++ + ++W+++ I+ VFYR++ GI+ Sbjct: 467 VYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615 The following BLAST results are available for this feature:
BLAST of FC876886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876886 ID=FC876886; Name=FC876886; organism=Citrus clementina; type=EST; length=752bpback to top |