FC876930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_HUMAN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.098e-49 Identity = 104/218 (47.71%), Postives = 138/218 (63.30%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFSPCIEQVQRSCES 777 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF S +AD++FLD+P PW A+ A LK + G CSFSPCIEQVQR+C++ Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGF--GVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQA 219
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_RAT (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.447e-49 Identity = 103/218 (47.25%), Postives = 141/218 (64.68%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFSPCIEQVQRSCES 777 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY DI+ + M LEL PG +V R++APTGH++T +FH+QRA ARE+F++ VS +VTV +D+ GF +AD++FLD+P PW A+ A LK + G CSFSPCIEQVQR+C++ Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGF--GVVHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQA 219
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_MOUSE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Mus musculus GN=Trmt61a PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.174e-49 Identity = 103/218 (47.25%), Postives = 140/218 (64.22%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFSPCIEQVQRSCES 777 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V ++GG+VY+L PTPELWT+ L HRTQILY DI+ + M LEL PG +V R+VAPTGH++T +FH+QRA ARE+F+ +S +VTV +D+ GF +AD++FLD+P PW A+ A LK + G CSFSPCIEQVQR+C++ Sbjct: 4 VAYEELIKEGDTAILSLGHGSMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVICSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRSVAPTGHLHTVEFHQQRADKAREEFQEHRLSQWVTVHTQDVCCSGF--GVVHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQA 219
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_BOVIN (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A OS=Bos taurus GN=TRMT61A PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.299e-49 Identity = 104/218 (47.71%), Postives = 138/218 (63.30%), Query Frame = 1 Query: 130 ISFTRCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHS-DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLK-QDGILCSFSPCIEQVQRSCES 777 +++ IKEGD I+ H M AV+V + + Q R G +HS D IG+PFGS V +GG+VY+L PTPELWTL L HRTQILY DI+ + M LEL PG +V R +APTGH++T +FH+QRA ARE+F+ V +VTV +D+ GF S +AD++FLD+P PW A+ A LK + G CSFSPCIEQVQR+C++ Sbjct: 4 VAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALLTMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAERAREEFQEHRVGRWVTVLNQDVCRSGF--GVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQA 219
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_DICDI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum GN=trmt61a PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.815e-44 Identity = 91/213 (42.72%), Postives = 134/213 (62.91%), Query Frame = 1 Query: 142 RCIKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQG-QGF-PDEFSGLADSIFLDLPQPWLAIPSAKKMLKQDGILCSFSPCIEQVQRSC 771 + IKEGD V++Y D M + + N+ + ++FG+++H + IGK +GS + S+ G GF +++A TPELW++ L HRTQIL+ DIS +I LEL G AR +AP GH++TF+FHE+R AR+DF+ G+ ++TV RD G +GF + + D++FLDLP PW AI +A ++ +LCSFSPCIEQVQ +C Sbjct: 6 KIIKEGDRVVMYNGKDNMAVLTMESNNVYNSKFGSYRHKNIIGKEYGSKLSSDNGNGFCHVIAMTPELWSITLDHRTQILFNLDISTIIFNLELKNGSRAVESGTGSGSLSSSIARTIAPKGHLFTFEFHEERVKFARKDFKDNGLDQYITVTHRDACGKEGFLRQDINNDIDAVFLDLPSPWDAIENAIAVMHDGSMLCSFSPCIEQVQNTC 218
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_KLULA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Kluyveromyces lactis GN=TRM61 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.665e-37 Identity = 91/235 (38.72%), Postives = 130/235 (55.32%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF--------PDEFSG--------LADSIFLDLPQPWLAIPSAKKMLKQDG--ILCSFSPCIEQVQRSCES 777 IKEGDLV+ + D +K + V F R+GAF HSD IGKPFGS + SN+ GF+++L PTPELW++ L HRTQI+Y D S+++ +E P V AR+ GH+++++FHE R A+++F+ G+ + T+ RD+ GF EF G AD IFLDLP PW AIP+ ++ ++ LC FSPCIEQV ++ E+ Sbjct: 11 IKEGDLVLAWLSRDNLKPITVKAGEVFNTRYGAFSHSDMIGKPFGSQIAIRTKGSNRFGFIHVLQPTPELWSISLPHRTQIVYTPDSSYIMQRMECNPRSRVIEAGTGSGSFSHAFARS---AGHLFSYEFHEVRYEQAKQEFKEHGLLEAGNTTITHRDVCKDGFEIKNGDTTSHEFRGPEETKVELNADCIFLDLPAPWDAIPNLTSVISKEKKVNLCCFSPCIEQVDKTLEA 242
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_CRYNE (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Cryptococcus neoformans GN=TRM61 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.252e-37 Identity = 85/211 (40.28%), Postives = 127/211 (60.19%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG--GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFSPCIEQVQRS 768 I+ GD+VI+Y D M A+ + F N++G + H IG+ +GS + S G+V++L PTPELWTL L HRTQILY+ DIS++ M L + G V +R+V P+G V +F++H QR +A ++FE G+++ V + R++ +GF D + +FLDLP PW AIP A K L++D I +C FSPC+EQV ++ Sbjct: 14 IEAGDIVILYMARDNMTAITITPGETFHNKYGRYPHDMLIGQKYGSKIHSPPPHPGYVHVLRPTPELWTLSLPHRTQILYLPDISYITMRLGVRVGGKVIEAGTGSGSMTHSLSRSVGPSGQVMSFEYHRQRFETALKEFESHGLTN-VRLQHRNVCKEGFGDAQG--VEGVFLDLPAPWEAIPHAVKALRRDIITRICCFSPCLEQVLKT 221
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_CANAL (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida albicans GN=TRM61 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.292e-36 Identity = 88/212 (41.51%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFP-DEFSGLADSIFLDLPQPWLAIPSAKKML---KQDGILCSFSPCIEQVQRS 768 I+EGDLV+ Y +K + V + F R+G F+H IG +G + KG GF++LL PTPELWTL L HRTQI+Y D S++I L + PG V AR V +G V+T++FHE R A+++ E + + T+ RD+ GF D S D +FLDLP PW AIP ++ K GI C FSPCIEQV R+ Sbjct: 10 IEEGDLVLAYISRSTIKPINVKKGEIFNTRYGHFEHDKMIGMKYGEQMPGAKGYGFIHLLHPTPELWTLSLPHRTQIVYSPDSSYIIQRLNVKPGSRVIEAGTGSASFTHSFARTVTLSGKVFTYEFHEPRYLEAKKELEEHKLDN-TTITHRDVCNDGFSIDNESIEGDVVFLDLPSPWDAIPHLDSVISTSKAAGI-CCFSPCIEQVDRT 219
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_DEBHA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Debaryomyces hansenii GN=TRM61 PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.627e-35 Identity = 80/222 (36.04%), Postives = 121/222 (54.50%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSNKG-GFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF-----PDEFSG----LADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFSPCIEQVQRSCES 777 I+EGDLV+ + +K + V + S R+G F+H IG +G + KG GF++LL PTPELWT+ L HRTQI+Y D S++I L + G V AR + G ++T++FHE R A+++ E G+ + + RD+ GF P++F D +FLDLP PW AIP+ K ++ +C FSPCIEQV+++ ++ Sbjct: 10 IEEGDLVLAFLGRSNIKPITVTKGSQLNTRYGNFEHDRMIGMKYGEQMPGAKGVGFIHLLYPTPELWTVSLPHRTQIVYTPDSSYIIQRLNVTSGTRVIEAGTGSGSFSHSFARTIGVEGRLFTYEFHEPRYIEAKKELEDHGLLANTVITHRDVCNDGFEISNIPEDFKKDDGICGDVVFLDLPSPWTAIPNLKSVISHQSRVGICCFSPCIEQVEKTVKA 231
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_YEAST (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Saccharomyces cerevisiae GN=GCD14 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.224e-34 Identity = 91/232 (39.22%), Postives = 124/232 (53.45%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTG-VSSFVTVGVRDIQGQGF--------PDEF-------SGLADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFSPCIEQVQRSCE 774 IKEGDL +++ D +K V++ F R+G+F H D IGKP+GS + SNK FV++L PTPELWTL L HRTQI+Y D S+++ L P V AR+V GH+++F+FH R A E+F+ G + VT+ RD+ GF EF S A+ +FLDLP PW AIP ++ D LC FSPCIEQV ++ + Sbjct: 13 IKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFAFVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSV---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDTTSYEFGNNETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFSPCIEQVDKTLD 241 The following BLAST results are available for this feature:
BLAST of FC876930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876930 ID=FC876930; Name=FC876930; organism=Citrus clementina; type=EST; length=777bpback to top |