FC876946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 7.578e-72 Identity = 155/224 (69.20%), Postives = 173/224 (77.23%), Query Frame = 1 Query: 94 MAAKSQIVTGF-TMPMTPAPXXXXXXXXXXLCMVKKPLTTSFFNGG-VGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSAK 759 M K QI +G + P+ P+ ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPEKILEQAVLEMNDDL KMRQATAQVLAS RLENKYKAA+QASE WYRKAQLALQKGEEDLAREALKRRKS+A NA++LKAQLDQQK+VV+NLVSNTRLLESKIQEARSKKDTL A AQSAK Sbjct: 1 MTTKFQIFSGLPSAPLQPSSS-----------LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAK 207
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.931e-67 Identity = 141/223 (63.23%), Postives = 168/223 (75.34%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSAK 759 MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A +R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ V+EMN DL KMRQATAQVLAS +L+NKYKAA+Q+S+ WY++AQLAL KG+EDLAREALKRRKS+A NA ALK QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL+A A++AK Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAK 218
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.610e-64 Identity = 135/186 (72.58%), Postives = 152/186 (81.72%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSAK 759 L TSF NG V +L++ ++R + +R C R NL DR +RVVKSYANA+LSSFEDPEKIL+QAVLEMNDDL KMRQATAQVLAS RLENKYKAAEQAS+ WYR+AQLALQKG+EDLAREALKRRKSYA NA++LKAQLDQQK VV NLVSNTR+LESKI EA+ KKDTL A AQSAK Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTRVLESKIAEAKQKKDTLKARAQSAK 204
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31 Identity = 72/147 (48.98%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSAK 759 M LFDRL RVV++ N ++S EDPEK+LEQAV++M +DLV++RQA A+ +A R E + Q ++ W +A+LAL GEE+LAREAL R+KS A A + QL QQ+ + NL N LE+KI EA++KK+ L A A++AK Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKISEAKTKKNMLQARAKAAK 147
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.270e-18 Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSAK 759 M++FDRL+R++++ N ++S EDP KI++QA+ +M R A +A +LE + + + + +KA+ AL+ G EDLAREAL+R +++ A Q Q++ V+ L + R LE+KI E SKK L A ++A+ Sbjct: 1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLRALEAKIDEMESKKTLLAARQKTAQ 147
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSA 756 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +L + + A W KA+LAL K EDLAR AL ++ +L+ ++ + + + LE+K+ E R+++ L+ Q+A Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAA 146
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSA 756 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +L + + A W KA+LAL K EDLAR AL ++ +L+ ++ + + + LE+K+ E R+++ L+ Q+A Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAA 146
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16 Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSA 756 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +L + + A W KA+LAL K EDLAR AL ++ +L+ ++ + + + LE+K+ E R+++ L+ Q+A Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAA 146
BLAST of FC876946 vs. ExPASy Swiss-Prot
Match: LIAH_BACSU (Protein liaH OS=Bacillus subtilis GN=liaH PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.166e-12 Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 373 LSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASHNRLENKYKAAEQASEHWYRKAQLALQKGEEDLAREALKRRKSYAYNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLIAMAQSAK 759 L E+P+ +L Q V +M D+ K +Q + + + KY+ A + + +AQLA GEE+LA++AL K A KA +Q + + +L LE+K+Q+ + KK LIA A +AK Sbjct: 18 LDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLAFDAGEEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQALIARANAAK 146 The following BLAST results are available for this feature:
BLAST of FC876946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876946 ID=FC876946; Name=FC876946; organism=Citrus clementina; type=EST; length=760bpback to top |