FC876954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 78/168 (46.43%), Postives = 114/168 (67.86%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQ-----LPDDLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGR-KPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTI 613 L++V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENY++E +EKA+ L +++W FIG+LQ V L+A VPNL M+++VD+ K+A ++N + +G + L+V+VQ+NTSG ESK G+ PS + +V+H++ CPNLEF GLMTI Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTI 183
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33 Identity = 77/168 (45.83%), Postives = 114/168 (67.86%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQ-----LPDDLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGR-KPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTI 613 L++V +RV QA R P + R+VAVSKTKP ++ + Y G R FGENY++E +EKA+ L +++W FIG+LQ V L+A VPNL ++++VD+ K+AG++N + +G + L+V+VQ+NTSG ESK G+ PS + +V+H++ CPNLEF GLMTI Sbjct: 17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTI 183
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/168 (45.24%), Postives = 115/168 (68.45%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQLP-----DDLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARG-RKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTI 613 L++V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENY++E +EKA+ +++W FIG+LQ V L+A VPNL+M+++VD+ K+A ++N + +G +PL+V+VQ+NTSG +SK G+ PS + +V+H+ SCP+LEF GLMTI Sbjct: 17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTI 183
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.926e-31 Identity = 75/168 (44.64%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQLP-----DDLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGR-KPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTI 613 L++V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENY++E +EKA+ +++W FIG+LQ V L+A VPNL+M+++VD+ K+A ++N + +G + L+V+VQ+NTSG SK G+ P+ LV+H++ CP+LEF GLMTI Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTI 183
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.359e-28 Identity = 80/190 (42.11%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQLPD--DLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRL----------NRMVEARGRKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHV--SQSCPN-LEFCGLMTIEMPDYTSTPENFE 652 L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENYI+E V K+ +L + +++W FIG++QSN+ K +L V NL +V++V+N KI +L N K L +++QVNTSG ESKSG +P L+LVKH +C N L F GLMTI P+ T +F+ Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPDFK 198
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.151e-27 Identity = 72/166 (43.37%), Postives = 101/166 (60.84%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKA---AQLPDDLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGRKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTIEMP 622 L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENY++E VEK AQ LEW FIG LQSN+ K + + +Q++D KIA RLN +KPL VL+Q+N S +SKSG++P+ L+L K + Q+ P+L GLM I P Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSGIQPNEMLDLAKQI-QNLPHLCLRGLMAIPAP 167
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.834e-26 Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQLPD---DLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGRKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTIEMP-DYTSTPEN 646 L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENY++E VEK +LEW FIG LQSN+ + + + +Q++D KIA RLN + PL VL+Q+N S ESKSG++P L L KH+ ++ P+L GLM I P D + EN Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQ-RPTNKAPLNVLIQINISDEESKSGIQPEEMLTLAKHI-ENLPHLCLRGLMAIPAPTDNIAEQEN 176
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.092e-25 Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQLPD-DLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGRKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTIEMP 622 + V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY++E + K A+L D L W FIG +QSN+ +P+ + V SVD KIA RL+ A G PL V +QVN SG SKSG P L + V Q PNL GLM I P Sbjct: 8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQRPA-GLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ-LPNLRLRGLMAIPEP 166
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25 Identity = 71/180 (39.44%), Postives = 106/180 (58.89%), Query Frame = 2 Query: 134 LQSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEK----AAQLPDD-LEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGRKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTI--EMPDYTSTPENFE 652 ++ + ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENY++E V K A PD+ +EW FIG +QSN+ + + + V ++D KIA RLN + KPL+VL+QVNTSG SKSGV + EL + +S+ PNL GLM+I + DY S F+ Sbjct: 8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPSE-LKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQ 182
BLAST of FC876954 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 197 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYIEEKVEKAAQLPDDLEWDFIGNLQSNRVKPLLAGVPNLAMVQSVDN*KIAGRLNRMVEARGRKPLRVLVQVNTSG*ESKSGVEPSRGLELVKHVSQSCPNLEFCGLMTI 613 + +VAVSK PV + + Y AG R FGENY++E ++K +PDD++W FIG+LQS++ K +A V NL ++++D K A +N EA + PL V +QVNTSG E+K GV PS+ LEL K V Q L GLMTI Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCKQV-QDMKYLRLKGLMTI 159 The following BLAST results are available for this feature:
BLAST of FC876954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876954 ID=FC876954; Name=FC876954; organism=Citrus clementina; type=EST; length=657bpback to top |