FC876960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2) HSP 1 Score: 370.933 bits (951), Expect = 3.631e-102 Identity = 178/216 (82.41%), Postives = 189/216 (87.50%), Query Frame = 2 Query: 65 MPPKQQ--SKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEEAE 706 MPPK+ SKA+LAKKQK+VEDKTFGLKNKNKSKNVQKYVQ+L Q VQPKPD +K LNDLFK+AVSQPKVPVGVDPKSI+CEF+K GQCQKGFKCKFSHDLNVQRKGEKIDIY+DKRD ETMEDWDQETLEKVV SK EYQQNKPTDIVCKYFL+AVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEE+E Sbjct: 1 MPPKKAAPSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLHQAVQPKPDPTKTAAKKKKEEEKAREKELNDLFKVAVSQPKVPVGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIYTDKRDAETMEDWDQETLEKVVASKGAEYQQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEESE 216
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=2 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 7.571e-100 Identity = 172/214 (80.37%), Postives = 188/214 (87.85%), Query Frame = 2 Query: 65 MPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKE-TMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEEA 703 MPPKQQ KA+LAKKQK VEDKTFGLKNKNKSKNVQKYVQ+LKQ+VQPKPD +K LN+LFK+A+SQPKVPVGVDPKSILCEF+KAGQCQKGFKCKFSHDLN+QRKGEKIDIYSD RD++ M++WDQETLEKVVESK EY QNKPTDIVCKYFL+AVEKKQYGWFW CPNGGK+CHYRHALPPGYVLKSQMKALLEEE+ Sbjct: 1 MPPKQQPKADLAKKQKQVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDATKAAAKKKKEEEKAREQELNELFKVAISQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDTRDEDGDMDEWDQETLEKVVESKKNEYNQNKPTDIVCKYFLDAVEKKQYGWFWSCPNGGKECHYRHALPPGYVLKSQMKALLEEES 214
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_RAT (Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55 Identity = 112/229 (48.91%), Postives = 148/229 (64.63%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEE 700 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLEA+E +YGWFWVCP GG +C YRHALPPG+VLK K +E+ Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLKKDKKKEEKED 228
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_MOUSE (Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55 Identity = 112/229 (48.91%), Postives = 148/229 (64.63%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEE 700 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLEA+E +YGWFWVCP GG +C YRHALPPG+VLK K +E+ Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLKKDKKKEEKED 228
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_HUMAN (Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.419e-55 Identity = 113/229 (49.34%), Postives = 147/229 (64.19%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEE 700 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK K +E+ Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKED 228
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_BOVIN (Zinc finger CCCH domain-containing protein 15 OS=Bos taurus GN=ZC3H15 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.419e-55 Identity = 113/229 (49.34%), Postives = 147/229 (64.19%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEE 700 MPPK+Q+ KAE KK+KI+EDKTFGLKNK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK K +E+ Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKED 228
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENTR (Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.265e-54 Identity = 112/221 (50.68%), Postives = 143/221 (64.71%), Query Frame = 2 Query: 71 PKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEE 700 P+ K E KK+KI+EDKTFGLKNK +K QK+++N+ V Q P Q++ LNDLFK V+ KV G DPKS++C FYK GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ KP T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK K ++E Sbjct: 10 PQSGKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVIHQVKFGQQNPRLVAQAEGEKKTKKDDKKKELLELNDLFKPVVAAQKVSKGADPKSVVCAFYKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDEELEKDTMENWDEKKLEEVVNKKHGEAEKIKPKTQIVCKFFLEAIENNKYGWFWVCPGGGDMCMYRHALPPGFVLKKDKKKEEKDE 229
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.202e-54 Identity = 110/223 (49.33%), Postives = 144/223 (64.57%), Query Frame = 2 Query: 65 MPPKQQS-------KAELAKKQKIVEDKTFGLKNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNKP-TDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMK 682 MPPK+Q KA+ KK+KI+EDKTFGLKNK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCKYFL+A+E +YGWFWVCP GG +C YRHALPPG+VLK K Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEDLEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLKKDKK 223
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.117e-53 Identity = 112/223 (50.22%), Postives = 142/223 (63.68%), Query Frame = 2 Query: 65 MPPKQ-QSKAELAK-KQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV-----QPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAG-QCQKGFKCKFSHDLNVQRKGEKIDIYSDKR-DKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEEAE 706 MPPKQ QSK + K K+K VEDKTFGLKNKNKSK V YV ++ V Q K K + + Q KVP+GVDPKSI+CE++K G C KG +CKF+HDL RK EKIDIY+D+R D++TME+WD+ L+ VVE K + KPT I+CK+FL+A+E K+YGWFW CPNGG+ C Y+H LP GY LK + K+ E+E E Sbjct: 1 MPPKQAQSKKTVEKEKKKKVEDKTFGLKNKNKSKKVAAYVSQVEAQVKHSGLQNKEAALKEKAKRDKELAEKAKKEAESILVNTIVQSKVPLGVDPKSIVCEYFKQGVTCPKGNRCKFAHDLAAGRKSEKIDIYTDRRKDEDTMENWDEAKLKSVVEKKRTTENKAKPTAIICKFFLDAIESKKYGWFWECPNGGEKCAYQHCLPEGYQLKKK-KSREEDEVE 222
BLAST of FC876960 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENLA (Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.071e-53 Identity = 108/213 (50.70%), Postives = 138/213 (64.79%), Query Frame = 2 Query: 71 PKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNKEYQQNK-PTDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQ 676 P+ K E KK+KI+EDKTFGLKNK +K QK+++N+ V Q P Q++ LNDLFK V KV G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ K T IVCK+FLEA+E +YGWFWVCP GG C YRHALPPG+VLK + Sbjct: 10 PQASKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVTHQVKSGQQNPRLVAQAEGDKKNKKDDKMKELQELNDLFKPVVVAQKVSKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDDELEKDTMENWDEKKLEEVVNKKHGEAEKIKAKTQIVCKFFLEAIENNKYGWFWVCPGGGDTCMYRHALPPGFVLKKE 221 The following BLAST results are available for this feature:
BLAST of FC876960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876960 ID=FC876960; Name=FC876960; organism=Citrus clementina; type=EST; length=708bpback to top |