FC877081

Overview
NameFC877081
Unique NameFC877081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.431e-21
Identity = 47/68 (69.12%), Postives = 60/68 (88.24%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFXTGAQSVCRELYSTLVGIQTGLIKDN 588
            QV E+ + VDE+++ADEVFCTGTAVVVAPVG+ITY+ KR+E+ TG +SVC++L S LVGIQTGLI+DN
Sbjct:  313 QVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDN 380          

HSP 2 Score: 88.5817 bits (218), Expect = 2.529e-17
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQV 177
            LYLDSV KK LEE SSCN+F++KG  ISTPAT+GTIL GITRKS++EIASD G+QV
Sbjct:  259 LYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQV 314          
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.751e-18
Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFXTGA-QSVCRELYSTLVGIQTGLIKDN 588
            QVEER + VDELLEADEVFCTGTAVVV+PVGS+TY+GKR+ +  G   +V ++LY+ L  +Q GLI+DN
Sbjct:  337 QVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDN 405          

HSP 2 Score: 78.5666 bits (192), Expect = 2.617e-14
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQV 177
            LYLD + K+ LEEVSSCNIFI+K N+ISTP   GTIL GITRKS+I++A   GFQV
Sbjct:  283 LYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQV 338          
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 40/57 (70.18%), Postives = 49/57 (85.96%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQVR 180
            L+LD+   KN+EEVS+CNIFILKGNI+STP TSGTIL GITRKSI E+A D G++V+
Sbjct:  226 LFLDAATGKNIEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQ 282          

HSP 2 Score: 72.7886 bits (177), Expect = 1.436e-12
Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFXTGAQSVCRELYSTLVGIQTGLIKD 585
            +V+ER + VDELLEA+EVFCTGTAVV+  V ++T+  KR+++ TG ++   +L+  L  IQ G+++D
Sbjct:  280 EVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKYRTGEEAFSTKLHLILTNIQMGVVED 346          
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15
Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEF-XTGAQSVCRELYSTLVGIQTGLIKDN 588
            +VEER + VDEL+EADEVFCTGTAVV++PVGSITY+ +R  +   G  +V ++LY++L  +Q GL +DN
Sbjct:  339 KVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDGFGTVSKQLYTSLTSLQMGLSEDN 407          

HSP 2 Score: 80.1073 bits (196), Expect = 8.994e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQV 177
            LYLD ++K+ LEEVSSCNIFI+K N+ISTP   GTIL GITRKSIIE+A   GF+V
Sbjct:  285 LYLDCLHKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKV 340          
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 36/56 (64.29%), Postives = 48/56 (85.71%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQV 177
            L+LD+   +N+EE+++CNIFI+KGNI+STP TSGTIL G+TRKSI E+A D G+QV
Sbjct:  223 LFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQV 278          

HSP 2 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 35/67 (52.24%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFXTGAQSVCRELYSTLVGIQTGLIKD 585
            QVEER + VDELLEA+EVFCTGTAVVV  V ++T+  K++++ TG  ++  +L+S L  IQ G+++D
Sbjct:  277 QVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEAALSTKLHSMLTNIQMGVVED 343          
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQV 177
            LYLD+   KN+EEVS+ NIF++KGN I TPATSGTIL GITRKSIIEIA D G++V
Sbjct:  255 LYLDADTGKNIEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKV 310          

HSP 2 Score: 79.7221 bits (195), Expect = 1.175e-14
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFXTGAQSVCRELYSTLVGIQTGLIKD 585
            +VEER++PV+EL EA+EVFCTGTA  VA VGSIT++  R E+  G   V ++L S LVGIQTG I+D
Sbjct:  309 KVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLRSILVGIQTGSIQD 375          
BLAST of FC877081 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  385 QVEERTIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFXTGAQSVCRELYSTLVGIQTGLIKD 585
            QVEERTIP+ + L+ADE FCTGTA +V  + S+T++ K+  F TG +++  +LY TL  IQTG ++D
Sbjct:  276 QVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTGFKTGEETLAAKLYETLSDIQTGRVED 342          

HSP 2 Score: 70.4774 bits (171), Expect = 7.127e-12
Identity = 28/56 (50.00%), Postives = 44/56 (78.57%), Query Frame = 1
Query:   10 LYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDYGFQV 177
            L+LD+   KN+EE+ + N+F+LKGN++STP  +GTIL G+TR  ++E+  D+G+QV
Sbjct:  222 LFLDAATGKNIEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQV 277          
The following BLAST results are available for this feature:
BLAST of FC877081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BCAT2_ARATH6.431e-2169.12Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT3_ARATH1.751e-1863.77Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT7_ARATH2.141e-1670.18Putative branched-chain-amino-acid aminotransferas... [more]
BCAT5_ARATH4.037e-1556.52Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT6_ARATH5.273e-1564.29Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT1_ARATH6.887e-1571.43Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH9.944e-1450.75Probable branched-chain-amino-acid aminotransferas... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAN2AC07RM1 EHR Citrus clementina cDNA clone KN0AAN2AC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877081 ID=FC877081; Name=FC877081; organism=Citrus clementina; type=EST; length=588bp
GCACGAGGCTTGTACCTAGACTCAGTGAATAAGAAAAATCTTGAGGAAGT
ATCTTCGTGTAACATTTTCATTTTAAAGGGCAATATTATTTCCACTCCTG
CTACAAGTGGAACCATTCTTGCAGGGATTACTAGGAAAAGCATAATTGAA
ATTGCTTCTGATTATGGTTTCCAGGTACGATATCCTTTATTATTTGGAAC
CATACGTTAACTGACGTGTTGTACATCTATTTCCTCTAAAATTTTACACA
ATTGGTGATTTCTAGTTTTGATAGCAGGATTTGGTAATCTCTTTTCTTTT
ACTCATCAACAGTCATATTTTATCGATTCACCTTGTATCTTATGTATCCT
TGGTGCATGCCTTCTAAAAACATTCAAATTGGGTCAGGTCGAGGAACGTA
CAATTCCAGTCGACGAATTGCTGGAGGCTGATGAAGTATTTTGCACAGGA
ACTGCAGTAGTCGTTGCTCCAGTAGGCAGCATAACATATCGTGGAAAAAG
AATTGAATTCNAAACGGGAGCTCAATCTGTGTGTCGGGAACTATACTCGA
CCCTCGTCGGAATTCAAACAGGTCTCATTAAAGATAAC
back to top