FC877088

Overview
NameFC877088
Unique NameFC877088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length801
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC877088 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 2.238e-61
Identity = 117/190 (61.58%), Postives = 144/190 (75.79%), Query Frame = 3 
Query:  237 NPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGG--DATTSADNAGADEAEEVGNEDESIVHHTASVGD 800
            N FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  +++ +NP   +   ERMA++KEDP LKPILDEI++GGPSAMMKYWND +VL+KLGEAMG+ V G  D T SA+     E  E G E+ESIVH TAS+GD
Sbjct:   45 NAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGMPVAGLPDQTVSAE----PEVAEEGEEEESIVHQTASLGD 230
The following BLAST results are available for this feature:
BLAST of FC877088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH2.238e-6161.58Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN3DA03RM1 EHR Citrus clementina cDNA clone KN0AAN3DA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877088 ID=FC877088; Name=FC877088; organism=Citrus clementina; type=EST; length=801bp
GCACGAGGTAATTTTAAAACCCAATCTAATCTCAATCTCCTTCACAGTCT
CTCCGATTCAGCAGCTGTTTAGTTCGCATGGCGTCTCCTCCCACCAAGGA
TGCTCCCGCTGATAAGAAAGCAGAAGGATCGACCCCTAAGTCAGAAGCAA
CTTCGGGGTCTGTTAGAGACTCATCCAGTTCGCCTTCCGCTGCTTCTGCT
GCAAGTGCTTTTCCAGGAGTTGGTGGCGCTGCTCCAAATCCTTTTGATTT
CTCCGCCATGAGTGGCCTTCTTAATGATCCGAGCATTAAGGAACTAGCTG
AACAGATTGCGAAAGATCCAGCATTCAATTCCATGGCCGAGCAACTTCAG
AAAACTTTGCATGGTGCAAATGCTGAGGAGAGTATTCCACAGTTTGACAC
AACACAGTATTACTCCACCATGCAACAGGTTATGCAGAATCCTCAGTTTA
TGACTATGGCTGAGCGCCTTGGTAATGCTTTAATGCAGGACCCATCAATG
TCTCATATGATGGAGAGTTTGACAAACCCTACAAAAAAAGACCAGATTGA
GGAAAGAATGGCAAAAATCAAGGAAGATCCCTCTTTGAAGCCTATTTTGG
ATGAGATAGAGTCTGGTGGACCATCTGCTATGATGAAGTACTGGAATGAT
AAAGATGTTTTGCAGAAATTGGGTGAAGCAATGGGTCTTGCAGTTGGTGG
GGATGCGACCACTTCTGCTGATAATGCGGGGGCAGATGAAGCAGAAGAAG
TGGGAAATGAGGATGAGTCAATTGTTCATCACACTGCCAGTGTTGGTGAT
G
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