FC877095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877095 vs. ExPASy Swiss-Prot
Match: YCIO_SHIFL (Uncharacterized protein yciO OS=Shigella flexneri GN=yciO PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 6.608e-22 Identity = 54/171 (31.58%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 49 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIAD 558 P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++ I QA+L+ + P++STS+ DP I D Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKD 162 HSP 2 Score: 33.4982 bits (75), Expect = 6.608e-22 Identity = 12/33 (36.36%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 575 LDFVVDGGVRMAEPSTVVDMTGTYPKIIRQGKG 673 +D ++ GG +P+TV+D+T P ++R+G G Sbjct: 168 VDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
BLAST of FC877095 vs. ExPASy Swiss-Prot
Match: YCIO_ECOLI (Uncharacterized protein yciO OS=Escherichia coli (strain K12) GN=yciO PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 6.608e-22 Identity = 54/171 (31.58%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 49 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIAD 558 P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++ I QA+L+ + P++STS+ DP I D Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKD 162 HSP 2 Score: 33.4982 bits (75), Expect = 6.608e-22 Identity = 12/33 (36.36%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 575 LDFVVDGGVRMAEPSTVVDMTGTYPKIIRQGKG 673 +D ++ GG +P+TV+D+T P ++R+G G Sbjct: 168 VDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
BLAST of FC877095 vs. ExPASy Swiss-Prot
Match: YCIO_ECOL6 (Uncharacterized protein yciO OS=Escherichia coli O6 GN=yciO PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 6.608e-22 Identity = 54/171 (31.58%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 49 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANI-FRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSVKWLKDNEWMVDPVVIAD 558 P + VE++++G V V PTD+ YA+ C ++ +A+ER+ RI+ + +++CR L ++ TY+ N+ FR +K+ PG YTFIL +KEVP++ ++ RK +G+R+P++ I QA+L+ + P++STS+ DP I D Sbjct: 9 PDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF---------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKD 162 HSP 2 Score: 33.4982 bits (75), Expect = 6.608e-22 Identity = 12/33 (36.36%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 575 LDFVVDGGVRMAEPSTVVDMTGTYPKIIRQGKG 673 +D ++ GG +P+TV+D+T P ++R+G G Sbjct: 168 VDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVG 200
BLAST of FC877095 vs. ExPASy Swiss-Prot
Match: Y1198_HAEIN (Uncharacterized protein HI1198 OS=Haemophilus influenzae GN=HI1198 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.153e-19 Identity = 45/153 (29.41%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 49 PSGADSWKLEPVVELLKEGAVGVVPTDTLYAIVCDLKSHSAIERLRRIKNVEPSKPLSILCRSLRDIDTYTTGFPRGDGQGHANIFRAVKHCLPGPYTFILTASKEVPKKCVRYGTTTAKYSLRKHVGVRIPNDAICQAILQKMDAPLISTSV 507 P + + VE+L++G V V PTD+ YA+ C + A++R+ I+ + +++C L ++ TY + + +R +K+ PG YTFILTA+KE+P++ + S RK +G+R+P++ I +L + P++S S+ Sbjct: 9 PENPQARLINQAVEILQKGGVIVYPTDSGYALGCMMGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTY--------ARVNNTAYRLIKNNTPGRYTFILTATKELPRRLMT--------SKRKTIGLRVPDNKIALDLLSALGEPILSCSL 145 HSP 2 Score: 35.8094 bits (81), Expect = 2.153e-19 Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 575 LDFVVDGGVRMAEPSTVVDMTGTYPKIIRQGKG 673 +D ++ GG EP+TVVD+T P I+R+G G Sbjct: 169 VDLIIHGGYLGQEPTTVVDLTEESPVILREGSG 201 The following BLAST results are available for this feature:
BLAST of FC877095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877095 ID=FC877095; Name=FC877095; organism=Citrus clementina; type=EST; length=763bpback to top |