FC877103

Overview
NameFC877103
Unique NameFC877103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC877103 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.569e-55
Identity = 103/163 (63.19%), Postives = 127/163 (77.91%), Query Frame = 3 
Query:  237 NPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGG--DATTSA 719
            N FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  +++ +NP   +   ERMA++KEDP LKPILDEI++GGPSAMMKYWND +VL+KLGEAMG+ V G  D T SA
Sbjct:   45 NAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGMPVAGLPDQTVSA 207
The following BLAST results are available for this feature:
BLAST of FC877103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH7.569e-5563.19Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN2AD09RM1 EHR Citrus clementina cDNA clone KN0AAN2AD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877103 ID=FC877103; Name=FC877103; organism=Citrus clementina; type=EST; length=719bp
GCACGAGGTAATTTTAAAACCCAATCTAATCTCAATCTCCTTCACAGTCT
CTCCGATTCAGCAGCTGTTTAGTTCGCATGGCGTCTCCTCCCACCAAGGA
TGCTCCCGCTGATAAGAAAGCAGAAGGATCGACCCCTAAGTCAGAAGCAA
CTTCGGGGTCTGTTAGAGACTCATCCAGTTCGCCTTCCGCTGCTTCTGCT
GCAAGTGCTTTTCCAGGAGTTGGTGGCGCTGCTCCAAATCCTTTTGATTT
CTCCGCCATGAGTGGCCTTCTTAATGATCCGAGCATTAAGGAACTAGCTG
AACAGATTGCGAAAGATCCAGCATTCAATTCCATGGCCGAGCAACTTCAG
AAAACTTTGCATGGTGCAAATGCTGAGGAGAGTATTCCACAGTTTGACAC
AACACAGTATTACTCCACCATGCAACAGGTTATGCAGAATCCTCAGTTTA
TGACTATGGCTGAGCGCCTTGGTAATGCTTTAATGCAGGACCCATCAATG
TCTCATATGATGGAGAGTTTGACAAACCCTACAAAAAAAGACCAGATTGA
GGAAAGAATGGCAAAAATCAAGGAAGATCCCTCTTTGAAGCCTATTTTGG
ATGAGATAGAGTCTGGTGGACCATCTGCTATGATGAAGTACTGGAATGAT
AAAGATGTTTTGCAGAAATTGGGTGAAGCAATGGGTCTTGCAGTTGGTGG
GGATGCGACCACTTCTGCT
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