FC877106

Overview
NameFC877106
Unique NameFC877106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 1.022e-65
Identity = 125/142 (88.03%), Postives = 136/142 (95.77%), Query Frame = -3
Query:  322 DDEIWKALEKCQLKTTISSLPNKLDSS-VSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAEYWSSCRRNS 744
            DDEIWKALEKCQLKTTIS+LPNKLDSS VSDEGENWS GQRQLFCLGRVLLKRN+ILVLDEA ASIDSATDAI+QRIIR+EF++CTVITVAHRVPTVIDSDMVMVLS+G L+EY+EPSKLMET+S FSKLVAEYW+SCR NS
Sbjct: 1148 DDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVAEYWASCRGNS 1289          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.885e-46
Identity = 84/133 (63.16%), Postives = 109/133 (81.95%), Query Frame = -3
Query:  346 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAEY 744
            D+EIWK+LE+CQLK  ++S P KLDS V+D GENWS GQRQL CLGRV+LKR+RIL LDEA AS+DS TDA++Q+IIR++FS+CT+I++AHR+PTV+D D V+V+  GK  EYD P +L+E  S F+ LV EY
Sbjct: 1400 DEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKIIREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLERQSLFAALVQEY 1532          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.298e-44
Identity = 80/133 (60.15%), Postives = 109/133 (81.95%), Query Frame = -3
Query:  346 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAEY 744
            D+EIWK+LE+CQLK  +++ P KLDS V D GENWS GQRQL CLGRV+LKR+R+L LDEA AS+DS TDA++Q+IIR++F++CT+I++AHR+PTV+D D V+V+  GK  E+D P++L+E  S F+ LV EY
Sbjct: 1377 DEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLERPSLFAALVQEY 1509          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.298e-44
Identity = 87/136 (63.97%), Postives = 108/136 (79.41%), Query Frame = -3
Query:  340 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLM-ETNSSFSKLVAEYWS 744
            D EIW+ L KCQLK  +    N LDS V ++G NWS GQRQLFCLGR +L+R+R+LVLDEA ASID+ATD ILQ+ IR+EF++CTVITVAHR+PTV+D  MV+ +S G+++EYDEP KLM + NS F KLV EYWS
Sbjct: 1246 DAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEYWS 1381          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.934e-44
Identity = 87/136 (63.97%), Postives = 112/136 (82.35%), Query Frame = -3
Query:  340 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLME-TNSSFSKLVAEYWS 744
            DD+IW+AL+KCQL   +     KLDSSVS+ G+NWS GQRQL CLGRVLLKR++ILVLDEA AS+D+ATD ++Q+ +R+ FS+CTVIT+AHR+ +VIDSDMV++LS G + EYD P +L+E  +SSFSKLVAEY S
Sbjct: 1372 DDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSDCTVITIAHRISSVIDSDMVLLLSNGIIEEYDTPVRLLEDKSSSFSKLVAEYTS 1507          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.177e-43
Identity = 84/137 (61.31%), Postives = 110/137 (80.29%), Query Frame = -3
Query:  337 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLME-TNSSFSKLVAEYWSS 744
            DD+IW+AL+KCQL   I     KLDS VS+ G+NWS GQRQL CLGRVLLKR+++L+LDEA AS+D+ATD ++Q  +RQ FS CTVIT+AHR+ +VIDSDMV++L  G + E+D P++L+E  +SSFSKLVAEY +S
Sbjct: 1344 DDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLLDQGLIEEHDSPARLLEDKSSSFSKLVAEYTAS 1480          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.755e-41
Identity = 84/143 (58.74%), Postives = 111/143 (77.62%), Query Frame = -3
Query:  319 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSS-FSKLVAEYWSSCRRNSY 744
            D EIW+AL+KCQL   I +   KLD++V + GENWS GQRQL CLGRVLLK++ ILVLDEA AS+DSATD ++Q+II QEF + TV+T+AHR+ TVI+SD+V+VLS G++ E+D P+KL++   S FSKL+ EY  S R N +
Sbjct:  889 DREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEY--SLRSNHF 1029          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.994e-41
Identity = 82/142 (57.75%), Postives = 108/142 (76.06%), Query Frame = -3
Query:  322 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSS-FSKLVAEYWSSCRRNS 744
            DD+IW+AL+ CQL   +     KLDS VS+ G+NWS GQRQL CLGRVLLKR+++LVLDEA ASID+ATD ++Q  +R  F++CTVIT+AHR+ +VIDSDMV++L  G + E+D P++L+E  SS FSK VAEY +S    S
Sbjct: 1322 DDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIKEHDSPARLLEDRSSLFSKFVAEYTTSSESKS 1463          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.106e-41
Identity = 82/143 (57.34%), Postives = 111/143 (77.62%), Query Frame = -3
Query:  319 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSS-FSKLVAEYWSSCRRNSY 744
            D EIW+A++KCQL   I +   +LD++V + GENWS GQRQL CLGRVLLK++ ILVLDEA AS+DSATD ++Q+II QEF + TV+T+AHR+ TVI+SD+V+VLS G++ E+D P+KL++   S FSKL+ EY  S R N +
Sbjct: 1342 DHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEY--SLRSNHF 1482          
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.145e-39
Identity = 81/136 (59.56%), Postives = 105/136 (77.21%), Query Frame = -3
Query:  340 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSS-FSKLVAEYWS 744
            DD+IW+AL+K QL   +     KLDS V + G+NWS GQRQL  LGR LLK+ +ILVLDEA AS+D+ATD ++Q+IIR EF +CTV T+AHR+PTVIDSD+V+VLS G++ E+D P++L+E  SS F KLV EY S
Sbjct: 1371 DDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSS 1506          
The following BLAST results are available for this feature:
BLAST of FC877106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
AB8C_ARATH1.022e-6588.03ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB14C_ARATH6.885e-4663.16ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB4C_ARATH1.298e-4460.15ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB10C_ARATH1.298e-4463.97ABC transporter C family member 10 OS=Arabidopsis ... [more]
AB3C_ARATH4.934e-4463.97ABC transporter C family member 3 OS=Arabidopsis t... [more]
AB7C_ARATH4.177e-4361.31ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB15C_ARATH1.755e-4158.74Putative ABC transporter C family member 15 OS=Ara... [more]
AB6C_ARATH2.994e-4157.75ABC transporter C family member 6 OS=Arabidopsis t... [more]
AB9C_ARATH5.106e-4157.34ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB5C_ARATH2.145e-3959.56ABC transporter C family member 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3DB01RM1 EHR Citrus clementina cDNA clone KN0AAN3DB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877106 ID=FC877106; Name=FC877106; organism=Citrus clementina; type=EST; length=746bp
GATAAACTGAAAACTTTTTATTATTGAATCAATGTATTTTACACACTTAT
ATAACAAGTATCAATTCCTTGTTAATAATCTGTTACACATGCACGTAGTA
ATTCTTAAACCAATATAACAGATTGAGCCACGTCAGCTAGCTATAACAAA
CTGAGCCACGTCAGCTTAGGGAGCTAATCTGCTACAGTCCAACACACAGT
AACAATCATGTGCTCGCTTCCTCTGTTTCATCACAATTAACCAGTTTCAC
TAACAGTGGGACCCGTTCATGCAGAATTTCGGTTGTTGAGCTCATTACTG
AAAGTTATTCAAATTCTGGTAGGAATTTCTCCTGCAACTTGACCAGTACT
CTGCTACAAGCTTGGAAAAGGAGGAATTAGTTTCCATAAGCTTTGATGGT
TCATCATACTCCAACAATTTTCCATATGAGAGCACCATGACCATGTCACT
ATCAATAACAGTTGGTACTCTATGAGCTACCGTTATCACTGTGCAGTTGG
AGAATTCCTGCCTGATAATTCTCTGTAGAATAGCATCTGTTGCGGAATCA
ATGGAAGCGTTAGCTTCATCCAGAACTAGAATTCTATTTCTCTTTAGGAG
GACTCTTCCAAGGCAAAAGAGTTGGCGTTGCCCCGCGCTCCAATTTTCAC
CTTCATCACTCACAGATGAGTCCAGCTTATTGGGCAGGCTGCTGATAGTT
GTCTTAAGCTGACACTTCTCCAGAGCCTTCCATATTTCATCATCTG
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