FC877111

Overview
NameFC877111
Unique NameFC877111
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length471
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.604e-30
Identity = 61/96 (63.54%), Postives = 79/96 (82.29%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWVNLI 298
            RDIK+SNIL+D+ F A++SDFGLAKL     +HITTRVMGTFGY+APEYA++G L EKSD++SFGV+LLE ITGR PVD  +P  + +LVEW+ ++
Sbjct:  308 RDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMM 403          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 5.801e-30
Identity = 59/93 (63.44%), Postives = 79/93 (84.95%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWV 289
            RDIKSSNILLD  + A+VSDFGLAKL    ++++TTRVMGTFGY+APEYA +G L EKSD++SFG++++E+ITGR PVD S+P G+ +LV+W+
Sbjct:  279 RDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWL 371          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.580e-27
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDAN-THITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEW 286
            RD KSSNILLD  F  ++SDFGLAKL    + +H++TRVMGT+GY APEYA +G+LT KSDV+SFGVV LELITGRK +D+  P G+++LV W
Sbjct:  212 RDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAW 304          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.519e-27
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWVNLI 298
            RDIKSSNILLD N EA+VSDFGLAKL  D  +HITT V GTFGY+APEY  SG+ TEK+DV+SFGV++LE+++G+ P DAS      ++V W+N +
Sbjct:  426 RDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFL 521          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.840e-27
Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWVNLI 298
            RDIKSSNILLD N EA+VSDFGLAKL  D  +HITT V GTFGY+APEY  SG+ TEK+DV+SFGV++LE+++G++P DAS      ++V W+  +
Sbjct:  428 RDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFL 523          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.840e-27
Identity = 58/108 (53.70%), Postives = 84/108 (77.78%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLA-LDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWVN--LIDAKILFKLV 325
            RD K+SNILLD+ + A++SDFGLAK   +   +H++TRVMGT GY APEY ++G LT KSDV+SFGVVLLEL++GR+ VD ++P G+ +LVEW    L++ + +F+++
Sbjct:  202 RDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVI 309          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.337e-26
Identity = 55/93 (59.14%), Postives = 78/93 (83.87%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLA-LDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEW 286
            RD K+SNILLD+N+ A++SDFGLA+   +  N+H++TRVMGT GY APEY ++G L+ KSDV+SFGVVLLEL++GR+ +D +QP+G+ +LV+W
Sbjct:  202 RDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDW 294          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 2.281e-26
Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLA-LDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWV 289
            RD K+SNILLD+N++A++SDFGLAKL   D  +H+TTR+MGT+GY APEY ++G L  KSDVF+FGVVLLE++TG    +  +P G ESLV+W+
Sbjct:  217 RDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWL 310          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 5.082e-26
Identity = 56/108 (51.85%), Postives = 84/108 (77.78%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDAN-THITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWVN--LIDAKILFKLV 325
            RD K+SNILLD+ + A++SDFGLAK     + +H++TR+MGT+GY APEY ++G LT KSDV+S+GVVLLE+++GR+ VD ++P G++ LVEW    L + + LF+++
Sbjct:  203 RDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVI 310          
BLAST of FC877111 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.931e-25
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 2
Query:   11 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWV 289
            RDIKSSNILL + F A ++DFGLA+L L  +TH+TT ++GT GY+ PEY  +   T K DV+SFGVVLLEL+TGR+P+D  +P G   L+ WV
Sbjct:  868 RDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWV 960          
The following BLAST results are available for this feature:
BLAST of FC877111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 249
Match NameE-valueIdentityDescription
Y2296_ARATH2.604e-3063.54Probable receptor-like protein kinase At2g42960 OS... [more]
Y1154_ARATH5.801e-3063.44Probable serine/threonine-protein kinase At1g01540... [more]
PBS1_ARATH1.580e-2763.44Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
FEI2_ARATH3.519e-2761.46LRR receptor-like serine/threonine-protein kinase ... [more]
FEI1_ARATH7.840e-2760.42LRR receptor-like serine/threonine-protein kinase ... [more]
APK1A_ARATH7.840e-2753.70Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH1.337e-2659.14Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CX32_ARATH2.281e-2659.57Probable serine/threonine-protein kinase Cx32, chl... [more]
APK1B_ARATH5.082e-2651.85Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
PSKR1_DAUCA1.931e-2556.99Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3DB06RM1 EHR Citrus clementina cDNA clone KN0AAN3DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877111 ID=FC877111; Name=FC877111; organism=Citrus clementina; type=EST; length=471bp
GCACGAGGACAGAGATATCAAGTCATCGAATATTCTTCTAGATAACAACT
TTGAGGCTCAAGTTTCAGACTTCGGGCTTGCCAAGTTAGCTCTTGATGCA
AATACACATATCACGACTCGCGTTATGGGAACTTTCGGATACATGGCCCC
TGAATATGCATCAAGTGGCAAGTTAACTGAGAAATCTGATGTATTCTCAT
TTGGAGTTGTGCTTTTGGAGCTAATTACCGGCCGGAAGCCCGTCGATGCA
TCCCAACCCTTGGGAGATGAGAGTCTAGTTGAATGGGTAAATTTGATAGA
TGCCAAAATCTTGTTTAAACTTGTCTTCCTTTGTCAACAAAATTCAAACT
CAATCTTCTAAACAGGGTAGGGATGCATAAATGGTCTATTAAACTAAATC
TTTTGACTTTGATTGTAAGTCACTTTGCTTGATTTTGATAATATGGTAAA
AGCTTTAGTTATACAGAGTTC
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