FC877114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_ARATH (Valyl-tRNA synthetase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2) HSP 1 Score: 489.189 bits (1258), Expect = 1.222e-137 Identity = 227/278 (81.65%), Postives = 254/278 (91.37%), Query Frame = 1 Query: 10 LKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 LKE+G+Y+DHW+VAR E +A A +KF GKKFE+ +DPDVLDTWFSSGLFPLSVLGWPD TDD KAFYPTSVLETGHDILFFWVARMVM+G+KLGGEVPF+KVY HPMIRDAHGRKMSKSLGNVIDPLEVING++LEGLHKRLEEGNLDPKE+ VAK+GQ DFPNGIPECGTDALRFALVSYTAQSDKINLDI RVVGYRQWCNKLWNAVRF+M KLG+G+ PP L P +PFSC+WILSVLNKAIS+T SL+++EFSDAA+T+Y+WWQYQFCD Sbjct: 579 LKEVGAYSDHWVVARTEDDAREEAAQKFLGKKFELTRDPDVLDTWFSSGLFPLSVLGWPDVTDDFKAFYPTSVLETGHDILFFWVARMVMMGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDPKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWNAVRFAMMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAISKTVVSLDAFEFSDAANTIYAWWQYQFCD 856
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYVC_HUMAN (Valyl-tRNA synthetase OS=Homo sapiens GN=VARS PE=1 SV=4) HSP 1 Score: 331.643 bits (849), Expect = 3.260e-90 Identity = 159/272 (58.46%), Postives = 200/272 (73.53%), Query Frame = 1 Query: 37 HWIVARDEKEALAVANKKF--SGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP-PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 +W+ R+E EA A K+F S K + QD DVLDTWFSSGLFPLS+LGWP+ ++DL FYP ++LETGHDILFFWVARMVMLG+KL G +PF +VYLH ++RDAHGRKMSKSLGNVIDPL+VI GISL+GLH +L NLDP E+E AK+GQKADFP GIPECGTDALRF L +Y +Q INLD+ R++GYR +CNKLWNA +F++ LG+GFVP P + +WI S L +A+ + +Y+F + YS+W Y+ CD Sbjct: 753 YWVSGRNEAEAREKAAKEFGVSPDKISLQQDEDVLDTWFSSGLFPLSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCD 1024
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYVC_MOUSE (Valyl-tRNA synthetase OS=Mus musculus GN=Vars PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.605e-89 Identity = 155/272 (56.99%), Postives = 200/272 (73.53%), Query Frame = 1 Query: 37 HWIVARDEKEALAVANKKF--SGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPH-NLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 +W+ R E EA A ++F S K + QD DVLDTWFSSGLFP S+ GWP+ ++DL FYP ++LETGHDILFFWVARMVMLG+KL G++PF +VYLH ++RDAHGRKMSKSLGNVIDPL+VI+G+SL+GL+ +L NLDP E+E AK+GQKADFP GIPECGTDALRF L +YT+Q INLD+ R++GYR +CNKLWNA +F++ LG+GFVP P + +WI S L +A+ + +Y+F + YS+W Y+ CD Sbjct: 752 YWVSGRTEAEAREKAAREFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCD 1023
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYVC_RAT (Valyl-tRNA synthetase OS=Rattus norvegicus GN=Vars PE=2 SV=2) HSP 1 Score: 325.094 bits (832), Expect = 3.051e-88 Identity = 154/272 (56.62%), Postives = 199/272 (73.16%), Query Frame = 1 Query: 37 HWIVARDEKEALAVANKKF--SGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP-PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 +W+ R E EA A ++F S K + QD DVLDTWFSSGLFP S+ GWP+ ++DL FYP ++LETGHDILFFWVARMVMLG+KL ++PF +VYLH ++RDAHGRKMSKSLGNVIDPL+VI+G+SL+GLH +L NLDP E+E AK+GQ+ADFP GIPECGTDALRF L +YT+Q INLD+ R++GYR +CNKLWNA +F++ LG+GFVP P + +WI S L +A+ + +Y+F + YS+W Y+ CD Sbjct: 753 YWVSGRTEAEAREKAAREFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTEKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSKPEGHESLVDRWIRSRLAEAVRLSNEGFQAYDFPAVTTAQYSFWLYELCD 1024
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYVC_DICDI (Probable valyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=valS1 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.047e-84 Identity = 157/288 (54.51%), Postives = 203/288 (70.49%), Query Frame = 1 Query: 4 RGLKELGSYNDHWIVARDEKEALAVANKKF--SGKK--FEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP----PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 +G+K + W+V +++EA A +KF S K + QDPDVLDTWFSSGLFP SV+GWP+ T D++ +YPTS+LETG DILFFWVARMVM+G +L G++PF +V+LH M+RD+HGRKMSKSLGNVIDP +VI GISL+ L +L EGNLD KE+E A G K+DFP GI ECGTDA+RFAL +YT+Q INLDIQRVVGYR +CNK+WNA RF+ KLG+ F P KL + + WIL+ +AI+ + Y+FS + +YS+W + CD Sbjct: 546 KGVKSNPYDTNQWVVGANQEEATQNAIEKFKLSSKDDILSLEQDPDVLDTWFSSGLFPFSVMGWPEQTQDMQDYYPTSLLETGSDILFFWVARMVMMGQQLTGKLPFEQVFLHAMVRDSHGRKMSKSLGNVIDPNDVIKGISLDELIAKLYEGNLDSKEIEKATSGVKSDFPTGIAECGTDAMRFALCAYTSQGRDINLDIQRVVGYRNFCNKIWNATRFAHMKLGDSFKPESFDASKLLQQSNAINL-WILNAAQRAITLSEEGFKEYDFSKVTTAIYSFWLNEMCD 832
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYVC_TAKRU (Valyl-tRNA synthetase OS=Takifugu rubripes GN=vars PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.733e-83 Identity = 151/270 (55.93%), Postives = 198/270 (73.33%), Query Frame = 1 Query: 43 IVARDEKEALAVANKKF--SGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP-PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 + R +EA A K+F S K + QD DVLDTWFSSG+ P S+LGWP++T+DL FYP ++LETGHDILFFWVARMVM+G+KL G++PF +VY ++RDAHGRKMSKSLGNVIDPL+ GI+LEGLH +L + NLDP E+E KK QKAD+PN IPECGTDALRFAL +YT+Q INLD+ R++GYR +CNKLWNAV+F+M LG+ FVP S +WILS L+ A+++ ++ +Y+F + +Y++W Y+ CD Sbjct: 702 VSGRTPEEAREKAAKRFNVSPDKIALRQDEDVLDTWFSSGINPFSILGWPNETEDLNVFYPGTLLETGHDILFFWVARMVMMGLKLTGKLPFKEVYHCAVVRDAHGRKMSKSLGNVIDPLDDHIGIALEGLHAQLMDTNLDPLEVEKPKKVQKADYPNCIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFAMRTLGDQFVPADTSPAEREESVSDRWILSRLSTAVAQCDAAFRTYDFPAITTAIYNFWLYELCD 971
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_CAEEL (Valyl-tRNA synthetase OS=Caenorhabditis elegans GN=vrs-2 PE=1 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 2.263e-83 Identity = 151/274 (55.11%), Postives = 199/274 (72.63%), Query Frame = 1 Query: 34 DHWIVARDEKEALAVANKKFSGKKFEMCQ--DPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGE--GFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 ++W+ AR E+EALA A +KF + E+ D DVLDTWFSSG++P +V GWPD T D+ F+P +VLETGHDILFFWVARMV + +L G++PF ++ LH MIRDAHGRKMSKSLGNVIDPL+VI GISL L +L GNLD KE+ VAK+GQ D+P+GIPECG DALRFAL+SYT+Q INLD+ RV GYR++CNKLW VRF+++++ + P +++ + + WILS L KA+ T +L +Y F+ A + Y++W Y FCD Sbjct: 532 NYWVSARTEQEALAKAAQKFQVPEAEILLKWDEDVLDTWFSSGMWPFAVFGWPDATKDMDLFFPGAVLETGHDILFFWVARMVFMAQELTGKLPFKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGISLNDLQAQLLGGNLDEKEIAVAKEGQARDYPDGIPECGVDALRFALLSYTSQGRDINLDVLRVHGYRKFCNKLWQVVRFALARISDKPEQKPTFEINLKSATPTDLWILSRLAKAVKETNEALKAYNFTQATTVTYNFWLYDFCD 805
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_SCHPO (Valyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=vas2 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 3.613e-81 Identity = 144/270 (53.33%), Postives = 186/270 (68.89%), Query Frame = 1 Query: 37 HWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLH-PHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 +W+ R ++A A F GK F + QD DVLDTWFSSGL+P S LGWP DT D + FYPT+++ETG DILFFW+ARMVMLG+KL G++PF +V+ H ++RDA GRKMSKSLGNV+DP++VI GISL+ LH +L GNLD +E+E AKKGQ+ +P GIP+CGTDALRF L S T +NLDI RV GYR++CNKL+NA +F++ +LG FVP N KWI LN A + ++ F A S V+ +W Y+ CD Sbjct: 545 YWVTGRTLEQAEEKAKAAFPGKSFTLEQDEDVLDTWFSSGLWPFSTLGWPKDTSDYENFYPTTLMETGWDILFFWIARMVMLGLKLTGKIPFKRVFCHALVRDAQGRKMSKSLGNVVDPIDVIEGISLQALHDKLLVGNLDSREVEKAKKGQRLSYPKGIPQCGTDALRFTLCSLTTGGRDLNLDILRVEGYRKFCNKLYNATKFALGRLGSNFVPNKTADLTGNESLVEKWIFHRLNIAAAAMNKNMEEMNFLQATSAVHQFWLYELCD 814
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_YEAST (Valyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=VAS1 PE=1 SV=2) HSP 1 Score: 298.901 bits (764), Expect = 2.342e-80 Identity = 144/271 (53.14%), Postives = 190/271 (70.11%), Query Frame = 1 Query: 34 DHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPP-LKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 D+W+ R +EA A K+ KF + QD DVLDTWFSSGL+P S LGWP+ T D++ FYP S+LETG DILFFWV RM++LG+KL G VPF +V+ H ++RDA GRKMSKSLGNVIDPL+VI GI L+ LH +L +GNLDP+E+E AK GQK +PNGIP+CGTDA+RFAL +YT INLDI RV GYR++CNK++ A +F++ +LG+ + PP + N KWIL L + +L+ +F + S++Y +W Y CD Sbjct: 595 DYWVAGRSMEEAEKKAAAKYPNSKFTLEQDEDVLDTWFSSGLWPFSTLGWPEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTGSVPFKEVFCHSLVRDAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGLSGNESLVEKWILHKLTETSKIVNEALDKRDFLTSTSSIYEFW-YLICD 864
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_NEUCR (Valyl-tRNA synthetase, mitochondrial OS=Neurospora crassa GN=cyt-20 PE=1 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.382e-79 Identity = 142/269 (52.79%), Postives = 188/269 (69.89%), Query Frame = 1 Query: 40 WIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTD-DLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 W+V R ++EA A A KF+G+KF + QDPD LDTWFSSGL+P+++LGWP+ + D K F+PTS+LETG DILFFWV+RM+ML +K+ GEVPFT+VY H +IRD+ GRKMSKSLGNVIDPL++I GI LE LH +L GNL +E+ A K QK FP GIPECG DA+RF L+SYT IN DI+ + YR++CNK+W A ++ + KL + F+P +L N KWIL +N A+ +L + EFS A Y ++ + CD Sbjct: 585 WVVGRTQEEAQAKAEAKFAGRKFTLEQDPDCLDTWFSSGLWPMAILGWPNTENLDFKKFFPTSMLETGWDILFFWVSRMIMLSLKMTGEVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIIRGIELEDLHAKLLVGNLKEEEVARATKYQKTAFPGGIPECGADAMRFTLLSYTTGGGDINFDIRVMHAYRRFCNKIWQASKYVLGKLPQDFMPKGELDTANFSVPEKWILHRMNVAVKGMNEALEAREFSRATKVAYQFFYDELCD 853 The following BLAST results are available for this feature:
BLAST of FC877114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877114 ID=FC877114; Name=FC877114; organism=Citrus clementina; type=EST; length=843bpback to top |