FC877207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877207 vs. ExPASy Swiss-Prot
Match: Y3893_DICDI (Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium discoideum GN=DDB_G0283893 PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 89/252 (35.32%), Postives = 140/252 (55.56%), Query Frame = 2 Query: 11 LEGVSGEN-EIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRV----------------------NLGGGTSGSARGECVY---TTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGNRLRLLTYDI 688 LE +G + +IG+ AENLL++++ +G+ + VS R ++ E A + RE +L+ LG+ Q+ G+ I+ + CMVCREGYS +PTD+LG+Y++SKR+ +L +SG G +Y TTV++FN IHF CH++A +AD ++K PK+EWEGA LRN ++ CN LFPV P + + Y D++W NLN + R +G + R+L++D+ Sbjct: 5392 LEETAGTSAKIGSLAENLLESIA----EGNEKTSKIVSDTRKESKMEKLSHAQKHREDVLKQLGLAQQ-----GKHIMAN--VVPGSIEDLDDDEGFTCMVCREGYSFKPTDVLGIYTFSKRIPLTSVGETTCPPSSTTNVAASLSLSPSSSGGGGGGALYYGFTTVTHFNFIHFNCHRDATKADRSMKVPKEEWEGAALRNQQTKCNGLFPVLPPKMNSDAFTPYSDKFWVNLNNISRVEGPKFRILSHDL 5632
BLAST of FC877207 vs. ExPASy Swiss-Prot
Match: POE_DROPS (Protein purity of essence OS=Drosophila pseudoobscura pseudoobscura GN=poe PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25 Identity = 72/192 (37.50%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 11 LEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSV 586 LE VS + +G+ AENLL+ LS D +V +R TR E +RLA+ RE+ L LGMR ++ G+ V A+ C +CREGY+ +P +LG+Y+++KR N+ S R YTTV++FN++H CH A R L + EWE A+L+N + CN L P+ GPSV Sbjct: 4938 LEQVSSDEHVGSLAENLLEALST-----DAATAARVQQVRDFTRAEKKRLAMATREKQLDALGMR---TNEKGQ--VTAKGSILQKIEKLRDETGLTCFICREGYACQPEKVLGIYTFTKRCNVEEFELKS-RKTIGYTTVTHFNVVHVDCHTSAIR----LTRGRDEWERASLQNANTRCNGLLPLWGPSV 5114
BLAST of FC877207 vs. ExPASy Swiss-Prot
Match: UBR4_RAT (E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus GN=Ubr4 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 2 Query: 11 LEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVP 589 LE VS + IG AENLL+ L + +K+ R TR E +R+A+ R++ L LGM ++ G+ VV + C +CREGY +PT +LG+Y+++KRV L R + Y+TVS+FNI+H+ CH A R L ++EWE A L+N + CN L PV GP VP Sbjct: 4762 LEQVSSDEGIGTLAENLLEALREHPD-----VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT---TNEKGQ--VVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVAL-EEMENKPRKQQGYSTVSHFNIVHYDCHLAAVR----LARGREEWESAALQNANTKCNGLLPVWGPHVP 4939
BLAST of FC877207 vs. ExPASy Swiss-Prot
Match: UBR4_MOUSE (E3 ubiquitin-protein ligase UBR4 OS=Mus musculus GN=Ubr4 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 2 Query: 11 LEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVP 589 LE VS + IG AENLL+ L + +K+ R TR E +R+A+ R++ L LGM ++ G+ VV + C +CREGY +PT +LG+Y+++KRV L R + Y+TVS+FNI+H+ CH A R L ++EWE A L+N + CN L PV GP VP Sbjct: 4748 LEQVSSDEGIGTLAENLLEALREHPD-----VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT---TNEKGQ--VVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVAL-EEMENKPRKQQGYSTVSHFNIVHYDCHLAAVR----LARGREEWESAALQNANTKCNGLLPVWGPHVP 4925
BLAST of FC877207 vs. ExPASy Swiss-Prot
Match: UBR4_HUMAN (E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 2 Query: 11 LEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVP 589 LE VS + IG AENLL+ L + +K+ R TR E +R+A+ R++ L LGM ++ G+ VV + C +CREGY +PT +LG+Y+++KRV L R + Y+TVS+FNI+H+ CH A R L ++EWE A L+N + CN L PV GP VP Sbjct: 4751 LEQVSSDEGIGTLAENLLEALREHPD-----VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT---TNEKGQ--VVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVAL-EEMENKPRKQQGYSTVSHFNIVHYDCHLAAVR----LARGREEWESAALQNANTKCNGLLPVWGPHVP 4928
BLAST of FC877207 vs. ExPASy Swiss-Prot
Match: POE_DROME (Protein purity of essence OS=Drosophila melanogaster GN=poe PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 72/197 (36.55%), Postives = 105/197 (53.30%), Query Frame = 2 Query: 11 LEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQY 601 LE VS + +G+ AENLL+ LS D +V +R TR E +RLA+ RE+ L LGMR ++ G+ V A+ C +CREGY+ +P +LG+Y+++KR N+ S R YTTV++FN++H CH A R L + EWE A+L+N + CN L P+ GP+V A + Sbjct: 4879 LEQVSSDEHVGSLAENLLEALST-----DSATAARVQQVRDFTRAEKKRLAMATREKQLDALGMR---TNEKGQ--VTAKGSILQKIEKLRDETGLTCFICREGYACQPDKVLGIYTFTKRCNVEEFELKS-RKTIGYTTVTHFNVVHVDCHTSAIR----LTRGRDEWERASLQNANTRCNGLLPLWGPAVGEAAF 5060 The following BLAST results are available for this feature:
BLAST of FC877207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877207 ID=FC877207; Name=FC877207; organism=Citrus clementina; type=EST; length=697bpback to top |