FC877821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.472e-17 Identity = 86/291 (29.55%), Postives = 140/291 (48.11%), Query Frame = 2 Query: 53 KRRTVRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSI--TSRDSLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSG-HRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 +R + +L++KL S + +K +A R I+EAG+IP L +L SS QE+A LLNLSI ++ S++S+ G + +I HVL++ L SL V+D Y+ IG I +L+ ++ + R KDA ALF + +Y N+ + I G V + LV N A ++++A A+++ ++ S E K G GSG R +ENA + +L+L + G + + + ++A NG+ +GK KAV LL Sbjct: 365 ERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISS-GAVPSIVHVLKN----GSMEARENAAATLFSLSVIDEYKVTIGG-MGAIPALVVLLGEGSQ--RGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILS----SHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCS-GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.472e-17 Identity = 86/291 (29.55%), Postives = 140/291 (48.11%), Query Frame = 2 Query: 53 KRRTVRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSI--TSRDSLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSG-HRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 +R + +L++KL S + +K +A R I+EAG+IP L +L SS QE+A LLNLSI ++ S++S+ G + +I HVL++ L SL V+D Y+ IG I +L+ ++ + R KDA ALF + +Y N+ + I G V + LV N A ++++A A+++ ++ S E K G GSG R +ENA + +L+L + G + + + ++A NG+ +GK KAV LL Sbjct: 365 ERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISS-GAVPSIVHVLKN----GSMEARENAAATLFSLSVIDEYKVTIGG-MGAIPALVVLLGEGSQ--RGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILS----SHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCS-GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.506e-17 Identity = 81/284 (28.52%), Postives = 133/284 (46.83%), Query Frame = 2 Query: 65 VRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSITSRD-SLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVAL 913 V+ LV +L S S T +KH+ + R +I +G+I L E+LYS+ A QENA LLNLSI + ++ G ++ + HVL + L SL V++ + IG + I L++++ N R KDA ALF ++++ N+ ++ G V+ L L+ AG+V+ A AV+A +A E + + GI + G KENA +ALL L G ++E A+ + ++Q+G+ + + K L Sbjct: 543 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLEN----GSSEAKENSAATLFSLSVIEENKIKIG-QSGAIGPLVDLL--GNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM--DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARG---KENAAAALLQLSTNSGRFCNMVLQEGAV---PPLVALSQSGTPRAREKVQTL 811
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.392e-17 Identity = 78/285 (27.37%), Postives = 133/285 (46.67%), Query Frame = 2 Query: 65 VRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSI-TSRDSLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 +R+LV +L S S + SK + R +I+EAG+IP L +L S A QENA +LNLSI + L+ G + +I VLR L SL + D + IIG I +L+++++ N R KDA ALF + +Y N+ + + G V L ++ + R +V++A +++ +A +++ K + R +ENA + LL+L E+ + + + D+++NG+ +GK KA++LL Sbjct: 333 IRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLR----AGTMEARENAAATLFSLSLADENKIIIGGS-GAIPALVDLLE--NGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQT---DQTRNRENAAAILLSLCKRDTEKL---ITIGRLGAVVPLMDLSKNGTERGKRKAISLL 604
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 80/285 (28.07%), Postives = 130/285 (45.61%), Query Frame = 2 Query: 65 VRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSITSRD-SLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 V+ L+ L S S T +++ + R +I+ +IP L +LYS+ Q +A LLNLSI + SL++ G + + HVL+ L SL V++ Y+ IG + I L++++ + L KDA ALF ++++ N+ +VI G V+ L L+ G+VE A V+A +A E + GI + G KENA +ALL L + ++E V + + ++G+A+GK KA LL Sbjct: 423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLK---TGYLEEAKANSAATLFSLSVIEEYKTEIG-EAGAIEPLVDLL--GSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM--DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARG---KENATAALLQLCTHSPKFCNNVIRE---GVIPPLVALTKSGTARGKEKAQNLL 693
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.313e-15 Identity = 82/292 (28.08%), Postives = 126/292 (43.15%), Query Frame = 2 Query: 56 RRTVRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSI--TSRDSLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIA----QIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVAL 913 + TV L+ L S+ +K E R I+EAG+IP+L +L S + QEN+ +LNLSI ++ +M L++I VL L SL V Y+ I + +L ++ +N R KDA+ AL+ ++ +P N ++I GGV L + N G+ E+A+ +A Q G E E G+ R KENAV+ALL L GG AE+V A +A + + G+ + + KA +L Sbjct: 405 KATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVL---VSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLL--QNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN---EGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTP------RGKENAVAALLELCRSGGAAVAEKVLR-APAIAGLLQTLLFTGTKRARRKAASL 681
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 82/288 (28.47%), Postives = 134/288 (46.53%), Query Frame = 2 Query: 56 RRTVRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSIT-SRDSLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 R V SL+ KL + + + +K + + R I+EAG+IP L E+L S QE++ LLNLSI + G + I VL++ L SL V+D + IGA I +LI +++ R KDA A+F + +Y N+ + + G V PL L+ + G G+V++A A++A ++ +E + I TGS R +ENA +A+L + G +E+ VA + ++ +NG+ + K KA +LL Sbjct: 344 RTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKN----GSMEARENAAATLFSLSVIDENKVAIGA-AGAIQALISLLE--EGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAG-GGMVDEALAILAILSTNQEGKTAIAEAESI--PVLVEIIRTGS-PRNRENA-AAILWYLCIGNIERLNVAREVGADVA--LKELTENGTDRAKRKAASLL 617
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14 Identity = 71/259 (27.41%), Postives = 120/259 (46.33%), Query Frame = 2 Query: 143 SKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSITS-RDSLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 ++ + E R +I+ AG+IP L ++L QENA TLLNLSI L+S G + I +L + L SL ++D + IG I L++++ ++ LR KDAL ALF ++L N+ + I G VQPL +L + G++++A +++ +A E + I T KE A S LL L G ++ + + V + + ++ +G+ + + KA AL+ Sbjct: 407 ARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILEN----GNREARENSAAALFSLSMLDENKVTIGLSNG-IPPLVDLL--QHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNL-LKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKN---KECATSVLLEL---GSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALI 651
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 75/260 (28.85%), Postives = 121/260 (46.54%), Query Frame = 2 Query: 143 SKHDAEIRPMISEAGSIPYLAEILYSSSHAFQENAAATLLNLSITSRD-SLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGH-RVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 +K +A+ R I+EAG+IP L +L + QE++ LLNLSI + + + G + I VL+ L SL V+D + IGA I L+ ++ R KDA ALF + +Y N+ + I G + L L+ G +G+V++A A++A ++ S E K G +G R +ENA + L++L + + E K + + + D+A NG+ +GK KA LL Sbjct: 380 AKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLK----KGSMEARENAAATLFSLSVIDENKVTIGA-LGAIPPLVVLL--NEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPG-SGMVDEALAILAILS----SHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQK---LGLMGPLIDLAGNGTDRGKRKAAQLL 624
BLAST of FC877821 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13 Identity = 74/286 (25.87%), Postives = 131/286 (45.80%), Query Frame = 2 Query: 65 VRSLVTKLGSVSEQTXXXXXXXXXXXSKHDAEIRPMISEAGSIPYLAEILYSSSHA-FQENAAATLLNLSITSRD-SLMSTRGLLDAISHVLRHHXXXXXXXXXXXXXXXLHSLLVVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQPLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIXXXXXXXXXXTGSGHRVKENAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALL 916 +R+LV KL S S + SK + R +I+EAG+IP L ++L S QENA +LNLSI + L+ G + +I VLR L SL + D + IIGA I+ +L++++ + +R KDA ALF + +Y N+ + + G V+PL ++ + + ++A +++ +A + + + I R +ENA + LL L E+ + + + +++++G+ + K KA +LL Sbjct: 343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLR----AGSMEARENAAATLFSLSLADENKIIIGASGAIM-ALVDLL--QYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQK---DQPRNRENAAAILLCLCKRDTEKL---ISIGRLGAVVPLMELSRDGTERAKRKANSLL 615 The following BLAST results are available for this feature:
BLAST of FC877821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877821 ID=FC877821; Name=FC877821; organism=Citrus clementina; type=EST; length=916bpback to top |