FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 8.386e-66 Identity = 155/299 (51.84%), Postives = 193/299 (64.55%), Query Frame = 1 Query: 55 MSPASA--DDNPLLFINQKPNVELQNQNXXXXXXXXXXXXINKELESEPINDYSSVISIDMP---YSNGSSSNELPNYPLLLSFNNLSYSVKVGQKLLP-----DLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SPA D LF N +VELQ + + +E E +D S + I + +S+ SS + P +LSF +L+YSVK+ +K P + PF G+ ISG AREGE+ A+LGASGS K+TL+DA+A RISK+ L+G +TLNGEVL S L K+ISAYVMQDDLL+ MLT+EETLMFSAEFRLP SLSK+KK+ RV ALIDQLGLR+AA T+IGDE H DIIHDPI+LFLDEP SGLD TSA+ VVKVL++IA+SGSIVI Sbjct: 8 LSPAKRVNGDGLPLFYNIHKSVELQRCHRDTARVSVTLAELLMSVEDEG-DDQSRAMDIAVASNFWSSVPSSRVPSSSPFVLSFKDLTYSVKIKKKFKPFPCCGNSPFDGNDMEMNTKVLLNG-ISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVI 304
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.523e-64 Identity = 152/302 (50.33%), Postives = 188/302 (62.25%), Query Frame = 1 Query: 22 HYHFPLAKNPTMSPASADDNPLLFINQKPNVE-LQNQNXXXXXXXXXXXXINKELESEPINDYSSVISIDMPYSNGSSSNELPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGS-QXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +Y P++ P P+ + F NVE +N IN S N ++S P S+ SSS P +LSF +L+YSVK+ +K P S ISG AREGE+ A+LGASGS K+TL+DA+A RI+K L+G++TLNGEVL S + K+ISAYVMQDDLL+ MLT+EETLMFSAEFRLPRSLSK+KK+ RV ALIDQLGLRSAA T+IGDE H DIIHDPI+LFLDEP SGLD TSA+ V+KVL++IA+SGSIVI Sbjct: 23 YYVNPMSVEPQGRPSDTTRVSVTFAEHLMNVEDARNDESASSRALGIASPINSAASS--FNSWASA-----PASSISSS------PFVLSFTDLTYSVKIQKKFNPLACCRRSGNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQSGSIVI 311
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 6.010e-64 Identity = 137/228 (60.09%), Postives = 166/228 (72.81%), Query Frame = 1 Query: 241 NGSSSNELPNYPLLLSFNNLSYSVKVGQKL-LPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +G + + + P +LSFNNL+Y+V V +KL DL + + ISG R+GEI A+LGASGS K+TL+DA+A RI+K LKGTVTLNGE L S++LK+ISAYVMQDDLL+ MLT+EETLMF+AEFRLPRSL K KK+ RV ALIDQLG+R+AA TIIGDE H DIIHDPI+LFLDEP SGLD TSAF VVKVLK+IA+SGSI+I Sbjct: 59 DGDNDHLMRPVPFVLSFNNLTYNVSVRRKLDFHDLVPW-RRTSFSKTKTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIII 285
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.933e-62 Identity = 139/246 (56.50%), Postives = 168/246 (68.29%), Query Frame = 1 Query: 220 SIDMPYSNGSSSNELPNYPLLLSFNNLSYSVKVGQKLL------------PDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 S++ Y++G + P +LSF+NL+Y+V V KL P++ +Q ISG R+GEI A+LGASGS K+TL+DA+A RI+K LKGTV LNGE L S++LK+ISAYVMQDDLL+ MLT+EETLMF+AEFRLPRSL K KK+ RV ALIDQLG+R+AA TIIGDE H DIIHDPILLFLDEP SGLD TSAF VVKVLK+IA+SGSIVI Sbjct: 50 SLNQDYNDGY----MRTVPFVLSFDNLTYNVSVRPKLDFRNLFPRRRTEDPEI----AQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVI 287
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.298e-62 Identity = 136/224 (60.71%), Postives = 158/224 (70.54%), Query Frame = 1 Query: 274 PLLLSFNNLSYSVKVGQKLL--------PDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 P +LSF +L+YSVKV +K P P G I+G AR+GEI A+LGASGS K+TL+DA+A RI+K LKG VTLNGEVL SK+ K ISAYVMQDDLL+ MLT+EETLMF+AEFRLPRSLSK KK RV ALIDQLGLR+AA T+IGDE H DIIHDPILLFLDEP SGLD TSA +V+KVLK+IA+SGS+VI Sbjct: 65 PFVLSFTDLTYSVKVRRKFTWRRSVSSDPGAPSEG--IFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQSGSMVI 286
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.637e-61 Identity = 131/222 (59.01%), Postives = 163/222 (73.42%), Query Frame = 1 Query: 259 ELPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGE-VLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 E + P LLSFNNLSY+V + ++ F S+ I+G AR+GEI A+LG SG+ K+TL+DA+AGR+++ LKGTVTLNGE VL S+LLK+ISAYVMQDDLL+ MLT++ETLMF++EFRLPRSL K KK +RV+ LIDQLGLR+AA T+IGDE H DIIHDPILLFLDEP SGLD T+AF VV+VLK+IA+SGS+VI Sbjct: 55 ETRSVPFLLSFNNLSYNVVLRRR------FDFSRRKTASVKTLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSVVI 270
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.637e-61 Identity = 131/222 (59.01%), Postives = 163/222 (73.42%), Query Frame = 1 Query: 256 NELPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +E+P P +L+FN+L+Y+V + Q+ L F S I+G A+EGEI AILGASG+ K+TL+DA+AG+I++ LKGTVTLNGE L S+LL++ISAYVMQ+DLL+ MLT+EETLMF+AEFRLPRSLSK KKR RV+ LIDQLGL + T+IGDE H DIIHDPI+LFLDEP SGLD TSAF VV+VLK+IA+SGSIVI Sbjct: 13 SEIPPIPFVLAFNDLTYNVTLQQRF--GLRFGHSPAKIKTLLNG---ITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIARSGSIVI 229
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.929e-59 Identity = 126/217 (58.06%), Postives = 160/217 (73.73%), Query Frame = 1 Query: 274 PLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGE-VLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 P +L+FNNL Y V + ++ FG +SG A +G+I A+LGASG+ K+TL+DA+AGR+++ L+G+VTLNGE VL S+LLK+ISAYVMQDDLL+ MLT++ETLMF++EFRLPRSLSK KK +RV+ALIDQLGLR+AA T+IGDE H DIIHDPI+LFLDEP SGLD T+AF VV+VLK+IA+SGSIVI Sbjct: 70 PYVLNFNNLQYDVTLRRR-------FGFSRQNGVKTLLDD-VSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSIVI 278
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.144e-30 Identity = 86/244 (35.25%), Postives = 129/244 (52.87%), Query Frame = 1 Query: 217 ISIDMPYSNGSSSNELP-------NYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRIS--KQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 + ++ P + + LP N P+ L F NL Y+VK L D + ++G+ + GEI A+LG SGS KT+L+ A+ GR+ K +L G ++ N + L SK +K + +V QDD LY LT+ ETL+F+A RLP S K++K K+ A++ +LGL TIIG +I+ +P LLFLDEP SGLD T+A +V +L ++A+ G V+ Sbjct: 8 MDVETPIAKTNDDRSLPFSIFKKANNPVTLKFENLVYTVK-----LKDSQGCFGKNDKTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVGEGKGKLTGNISYNNKPL-SKAVKRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEKIKQAKAVMTELGLDRCKDTIIGGPFLRGVSGGERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELARGGRTVV 245
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.415e-30 Identity = 79/216 (36.57%), Postives = 125/216 (57.87%), Query Frame = 1 Query: 274 PLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 P++L F L+YS+K + +FGSQ +SG+ + GE+ A+LG SGS KTTL+ A+AGR+ + +L GTV+ NGE S + K + +V QDD+LY LT+ ETL ++A RLP+ L++++K ++V+ ++ LGL ++IG +++ +P LL LDEP SGLD T+A +V L+ +A+ G V+ Sbjct: 65 PIILKFEELTYSIK--SQTGKGSYWFGSQEPKPNRLVLKC-VSGIVKPGELLAMLGPSGSGKTTLVTALAGRL-QGKLSGTVSYNGEPFTSSV-KRKTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVV 275 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |