FC877844

Overview
NameFC877844
Unique NameFC877844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3464 contig Ccv1_Contig3464:1..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV_DEBOC (Invertase OS=Debaryomyces occidentalis GN=INV PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20
Identity = 59/156 (37.82%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGN-ISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWT--LPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTAN 824
            RP  HF    GW NDP G  YD T  L++L +Q++P    WG  + WG ATS DL+HW++H        + +GP     ++  GIFSG+   V     T G   +      R+   +T  +P L   ++Q +A+S DGG T+ +YENNPVI V++N
Sbjct:   36 RPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEH-------EIAIGP----EHDNEGIFSGSI--VVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDL---QTQDIAFSLDGGYTFTKYENNPVIDVSSN 175          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV_KLULA (Invertase OS=Kluyveromyces lactis GN=INV1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.953e-18
Identity = 58/167 (34.73%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  330 NSMGNNSL-FTRWRPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWG-NISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTAN 824
            NS  N+S   +  RP  H+    GW NDP G  YD   + +++ YQ++P   +WG  ++WG A SKDL  W       D + +  GP     +   G FSG+   V     T G   +      R+   WTL Y  G+E+Q L+YS DGG T+ EY +NPV+ + ++
Sbjct:   32 NSTSNSSSSLSLNRPAVHYSPEEGWMNDPNGLWYDAKEEDWHIYYQYYPDAPHWGLPLTWGHAVSKDLTVW-------DEQGVAFGP----EFETAGAFSGSM--VIDYNNTSGFFNSSTDPRQRVVAIWTLDY-SGSETQQLSYSHDGGYTFTEYSDNPVLDIDSD 184          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV_DEBHA (Invertase OS=Debaryomyces hansenii GN=INV PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.265e-17
Identity = 59/167 (35.33%), Postives = 80/167 (47.90%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGN-ISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTANTAPMYWNITGFRD 863
            RP  H     GW NDP G  YD    +++  YQ++P    WG  + WG ++SKDL HWE+H        + LGP  +      GIFSG+   V     T G          R+   +T   +  T++Q +AYS DGG T+ +Y+ NPVI V         N T FRD
Sbjct:   35 RPLIHLTPNVGWLNDPNGLFYDKKTSVWHAYYQYNPNDTIWGQPLYWGHSSSKDLTHWEEH-------QVALGPQNDDE----GIFSGSI--VIDYNNTSGFFDESIDKDQRVVAIYT-NSIPDTQTQDIAYSLDGGETFTKYKKNPVIDV---------NSTQFRD 178          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: SACC_BACSU (Levanase OS=Bacillus subtilis GN=sacC PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.610e-16
Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  363 WRPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGNISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVI 809
            +RPQ HF   A W NDP G +Y      Y+L YQ+HP  + WG + WG A SKDL+ WE H+       + L P   GT     IFSG+A  V  +  T G    F T   +   +       G + QS+AYS D G T+ +Y  NPVI
Sbjct:   34 YRPQYHFTPEANWMNDPNGMVYYAGE--YHLFYQYHPYGLQWGPMHWGHAVSKDLVTWE-HL------PVALYPDEKGT-----IFSGSA--VVDKNNTSG----FQTGKEKPLVAIYTQDREGHQVQSIAYSNDKGRTWTKYAGNPVI 162          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV2_YEAST (Invertase 2 OS=Saccharomyces cerevisiae GN=SUC2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 57/167 (34.13%), Postives = 76/167 (45.51%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGN-ISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTANTAPMYWNITGFRD 863
            RP  HF    GW NDP G  YD     ++L +Q++P    WG  + WG ATS DL +WED       + + + P  N +    G FSG+   V     T G   +      R    WT      +E Q ++YS DGG T+ EY+ NPV+           N T FRD
Sbjct:   28 RPLVHFTPNKGWMNDPNGLWYDEKDAKWHLYFQYNPNDTVWGTPLFWGHATSDDLTNWED-------QPIAIAPKRNDS----GAFSGSM--VVDYNNTSGFFNDTIDPRQRCVAIWTY-NTPESEEQYISYSLDGGYTFTEYQKNPVLAA---------NSTQFRD 171          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INU1_KLUMA (Inulinase OS=Kluyveromyces marxianus GN=INU1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = 3
Query:  345 NSLFTRWRPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGN-ISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTAN 824
            N+ F+  RP  HF    GW NDP G  YD   + ++L YQ++P    WG  + WG A SKDL  W D+         +LGP  +      G FSG+   V     T G   +      R    WTL     +++Q ++YS DGG T++ Y +N V+ + ++
Sbjct:   32 NTTFSLNRPSVHFTPSHGWMNDPNGLWYDAKEEDWHLYYQYNPAATIWGTPLYWGHAVSKDLTSWTDY-------GASLGPGSDDA----GAFSGSM--VIDYNNTSGFFNSSVDPRQRAVAVWTLS-KGPSQAQHISYSLDGGYTFEHYTDNAVLDINSS 178          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV1_YEAST (Invertase 1 OS=Saccharomyces cerevisiae GN=SUC1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 55/169 (32.54%), Postives = 74/169 (43.79%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWG-NISWGQATSKDLIHWEDHVGWEDAEALTLGP--TGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTANTAPMYWNITGFRD 863
            RP  HF    GW NDP G  YD     ++L +Q++P    WG  + WG ATS DL HW+D       E + + P    +G Y+G  +             T G   +      R    WT      +E Q ++YS DGG T+ EY+ NPV+           N T FRD
Sbjct:   28 RPLVHFTPNKGWMNDPNGLWYDAKEGKWHLYFQYNPNDTVWGLPLFWGHATSDDLTHWQD-------EPVAIAPKRKDSGAYSGSMVID--------YNNTSGFFNDTIDPRQRCVAIWTY-NTPESEEQYISYSLDGGYTFTEYQKNPVLAA---------NSTQFRD 171          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV1_SCHPO (Invertase OS=Schizosaccharomyces pombe GN=inv1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGNISWGQATSKDLIHWED-----HVGWEDAEALTLGPTGNG---TYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTA 821
            RP+ HF   +G+ NDP G +Y  T  +Y++ +Q+ P+ +  G + WG   SKDLIHWE+     +    +   L+L  +G+     +N  G+FS    P       +  ++  YT        WT       E Q++AY+TDGG T+K+Y  NPV+ + +
Sbjct:   83 RPKIHFTPSSGFMNDPNGLVY--TGGVYHMFFQYSPKTLTAGEVHWGHTVSKDLIHWENYPIAIYPDEHENGVLSLPFSGSAVVDVHNSSGLFSNDTIP-------EERIVLIYTD------HWTGV----AERQAIAYTTDGGYTFKKYSGNPVLDINS 223          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV4_YEAST (Invertase 4 OS=Saccharomyces cerevisiae GN=SUC4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 56/167 (33.53%), Postives = 75/167 (44.91%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWG-NISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTANTAPMYWNITGFRD 863
            RP  HF    GW NDP G  YD     ++L +Q++P    WG  + WG ATS DL HW+D       E + + P  N +    G +SG+   V     T     +      R    WT      +E Q ++YS DGG T+ EY+ NPV+           N T FRD
Sbjct:   28 RPLVHFTPNKGWMNDPNGLWYDAKEGKWHLYFQYNPNDTVWGLPLFWGHATSNDLTHWQD-------EPVAIAPKRNDS----GAYSGSM--VIDHNNTSEFFNDTVDPRQRCVAIWTY-NTPESEEQYISYSLDGGYTFTEYQKNPVLAA---------NSTQFRD 171          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INU2_ASPFI (Inulinase OS=Aspergillus ficuum GN=inu2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 57/172 (33.14%), Postives = 79/172 (45.93%), Query Frame = 3
Query:  363 WRPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGNISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTA--QPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLG--TESQSLAYSTDGGLTYKEYENNPVIRVTANTAPMYWNITGFRDS 866
            +RP  HF     W N+P G +       ++L +Q +P    WGNI WG ATS DL+HW               PT     NG+  F+GTA   P N  G  D        S +    +W   Y     T+ Q LA+S D G T+ +++ NP+I  T+  AP   +ITG  +S
Sbjct:   28 YRPSYHFTPDQYWMNEPNGLI--KIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHK------------PTAIADENGVEAFTGTAYYDPNNTSGLGD--------SANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIIS-TSQEAP--HDITGGLES 174          
The following BLAST results are available for this feature:
BLAST of FC877844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
INV_DEBOC1.416e-2037.82Invertase OS=Debaryomyces occidentalis GN=INV PE=3... [more]
INV_KLULA2.953e-1834.73Invertase OS=Kluyveromyces lactis GN=INV1 PE=3 SV=... [more]
INV_DEBHA4.265e-1735.33Invertase OS=Debaryomyces hansenii GN=INV PE=3 SV=... [more]
SACC_BACSU3.610e-1638.93Levanase OS=Bacillus subtilis GN=sacC PE=1 SV=1[more]
INV2_YEAST2.340e-1534.13Invertase 2 OS=Saccharomyces cerevisiae GN=SUC2 PE... [more]
INU1_KLUMA2.340e-1532.92Inulinase OS=Kluyveromyces marxianus GN=INU1 PE=1 ... [more]
INV1_YEAST3.056e-1532.54Invertase 1 OS=Saccharomyces cerevisiae GN=SUC1 PE... [more]
INV1_SCHPO3.056e-1531.88Invertase OS=Schizosaccharomyces pombe GN=inv1 PE=... [more]
INV4_YEAST3.992e-1533.53Invertase 4 OS=Saccharomyces cerevisiae GN=SUC4 PE... [more]
INU2_ASPFI7.528e-1433.14Inulinase OS=Aspergillus ficuum GN=inu2 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27DH01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27DH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877844 ID=FC877844; Name=FC877844; organism=Citrus clementina; type=EST; length=929bp
ATCTTGTCTTCTGTGTTTCGTGTGTACCAATCAGGCCAACCCTTCGTAAC
CTGAACATCATGCGTACGACACTTGCATCTGCTTCGGTCCTGGCCATTGT
GCCAGCGGCTCTGGGCCAGCATCAAGGTTCCCCTGGCGGACCTGGCGGCT
CAGGCTCATGGTGGGGCAGCTGGGGCGGTGGTGCTCCAACATGGGGACCG
CAAGGCTGGGGCGGAGGACGGGGAGGACGCCCTTCGAGTGTGGCATCGTC
AGCGCCGACTTCGACCTCGGCAGCGCCAGCAGGCCCGAGCAGCACTCAAA
GCTGTGCGGTACTGACTGCAGACGCAATCAACTCGATGGGCAACAACTCT
CTATTCACTCGCTGGAGACCTCAGAACCACTTCATTGCCCCGGCAGGATG
GTCAAATGACCCTTGTGGAGCCATGTACGACCCTACCCGTGATCTTTACT
ACCTCTCCTACCAATGGCACCCTCAGCACATCAACTGGGGTAACATCAGC
TGGGGTCAGGCAACGAGCAAAGACCTGATTCACTGGGAGGATCACGTCGG
CTGGGAGGACGCTGAGGCCCTGACCCTCGGCCCTACCGGCAACGGTACAT
ACAACGGACTCGGTATCTTCTCCGGTACTGCGCAGCCCGTCAACCTCCAG
GGCAAAACCGACGGTACCCTGCTCAACTTCTACACCTCCGTCAGCCGTCT
CCCGACGAGCTGGACTCTGCCGTACCTGCTGGGTACCGAATCCCAGAGTC
TGGCCTACAGCACCGATGGCGGTCTGACCTACAAGGAGTACGAGAACAAC
CCGGTCATCCGTGTCACCGCCAACACAGCACCAATGTACTGGAACATCAC
AGGTTTCCGTGACTCATTCTTCGAGACTCTGCCCGAGCTCGATGCTGCGC
TTGGCGCGTCTGAGCTTCAATACTATGCT
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