FC877863

Overview
NameFC877863
Unique NameFC877863
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length845
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10554 contig Ccv1_Contig10554:46..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.778e-84
Identity = 160/252 (63.49%), Postives = 186/252 (73.81%), Query Frame = 3
Query:   90 SNLRRRSPDDGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSKIFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLALGIHQLNFRSNVLIDLIDSLC 845
            S+L   SP     SLC+ LI P  Y CTEH++QTKDGY+LALQRV+S     R+Q GPPVLL HGLFM GD WFL+S +ESLGFILADHGFDVWV NVRGT +S+GHVTLS+  K FWDWSWQDLA+YDLAEMI ++   ++SKIFLVGHS                           QGTI+S AALTQP V EMVEAAALL PISYLDH+TAPLV RMV MHLDQMV+ALG+HQ+NFRS++L+ L+DSLC
Sbjct:   21 SHLLHGSP---VNSLCADLIHPANYSCTEHSIQTKDGYILALQRVASLGP--RLQSGPPVLLQHGLFMAGDVWFLNSPKESLGFILADHGFDVWVGNVRGTRYSYGHVTLSDTDKEFWDWSWQDLAMYDLAEMIQYLYSISNSKIFLVGHS---------------------------QGTIMSFAALTQPHVAEMVEAAALLCPISYLDHVTAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLC 240          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36
Identity = 91/282 (32.27%), Postives = 141/282 (50.00%), Query Frame = 3
Query:   12 SLSSSLVVGAIFALLLREISAVKTDVSNLRRRSPD-DGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRV-SSRNGNLRVQCGP--PVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSKIFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLALGIHQLNFRSNVLIDLIDSLC 845
            S+  +L V   FAL L+ + A  T    L  + P       +C+  +   GY C EH V T+DGY+L +QR+   R G +    G   PVL+ HG+ + G +W L+  +++L  ILAD GFDVW+ N RGT +S  H  L+   + FW+W+W +L  YDL  M   I+  T  KI  +GHS                            GT++  A+ ++  +V+ V +AA+LSP++YL H+T  +        L +    LG  + N +S ++ D I ++C
Sbjct:   11 SIGLALSVLIFFALSLKTLEARGT-FGRLAGQPPQRTAAGGICASSVHIFGYKCEEHDVVTQDGYILNMQRIPEGRAGAVAGDGGKRQPVLIQHGILVDGMSWLLNPADQNLPLILADQGFDVWMGNTRGTRFSRRHKYLNPSQRAFWNWTWDELVSYDLPAMFDHIHGLTGQKIHYLGHSL---------------------------GTLIGFASFSEKGLVDQVRSAAMLSPVAYLSHMTTVIGDIAAKTFLAEATSILGWPEFNPKSGLVGDFIKAIC 264          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIPM_HUMAN (Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 80/240 (33.33%), Postives = 118/240 (49.17%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGN-LRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSS-KIFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAAL-TQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLAL-GIHQLNFRSNVLIDLIDSLC 845
            S +I+  GYPC E+ V T+DGY+L++ R+        +    P VLL HGL  G   W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A +DL  +I FI  KT   KI+ VG+SQ                           GT +   A  T P++ + ++    L+PI+ + H  +P  + ++    D M+  L G  +  +++  L  L+  LC
Sbjct:   50 SEIIQHQGYPCEEYEVATEDGYILSVNRIPRGLVQPKKTGSRPVVLLQHGLVGGASNWISNLPNNSLGFILADAGFDVWMGNSRGNAWSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQEKIYYVGYSQ---------------------------GTTMGFIAFSTMPELAQKIKMYFALAPIATVKHAKSPGTKFLLLP--DMMIKGLFGKKEFLYQTRFLRQLVIYLC 260          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LICH_MACFA (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Macaca fascicularis GN=LIPA PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.180e-25
Identity = 70/205 (34.15%), Postives = 100/205 (48.78%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVS-SRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAALTQ-PDVVEMVEAAALLSPISYLDHITAPLVR 743
            S +I   G+P  E+ V+T+DGY+L L R+   R  +      P V L HGL      W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A YDL   I FI  KT   +++ VGHS                           QGT +   A +Q P++ + ++    L+P+  +D  T+P+ +
Sbjct:   38 SEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHS---------------------------QGTTIGFIAFSQIPELAKRIKMFFALAPVVSVDFCTSPMAK 215          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LICH_HUMAN (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Homo sapiens GN=LIPA PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.822e-24
Identity = 71/213 (33.33%), Postives = 101/213 (47.42%), Query Frame = 3
Query:  114 DDGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRVS-SRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAALTQ-PDVVEMVEAAALLSPISYLDHITAPLVR 743
            D  T    S +I   G+P  E+ V+T+DGY+L L R+   R  +      P V L HGL      W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A YDL   I FI  KT   +++ VGHS                           QGT +   A +Q P++ + ++    L P++ +   T+P+ +
Sbjct:   30 DPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHS---------------------------QGTTIGFIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAK 215          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIPM_MOUSE (Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.380e-24
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLV-HGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQVET 554
            S +I+  GYP  E+ V T+DGY+L++ R+      L+ +   PV+L+ HGL      W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A +DL  +I FI  KT   K++ VG+SQ  T
Sbjct:   50 SEIIKHKGYPSEEYEVATEDGYILSVNRIPRGQTRLKKEGSRPVVLLQHGLLGDASNWISNLPNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQKKVYYVGYSQGTT 190          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIPN_MOUSE (Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 61/141 (43.26%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCG-----PPVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHS 542
            S +I  NGYP  E+ V T DGY+LA+ R+       R Q G     P V + H LF     W  +    SLGFILAD G+DVW+ N RG  WS  H TLS   + FW +S+ ++A YDL  +I FI  KT   K++ +GHS
Sbjct:   39 SEIIMYNGYPSEEYDVTTADGYILAINRIPHG----RAQTGQTGPRPVVYMQHALFADNAYWLENFANGSLGFILADAGYDVWMGNSRGNTWSRRHKTLSANEEKFWAFSFNEMAKYDLPGIIDFIVNKTGQEKLYFIGHS 175          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIPK_MOUSE (Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 66/202 (32.67%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVL-LVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSK-IFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPL 737
            S LI   GYP  +H V T+DGY+L   R+    G  R      V+ L HGL    + W  +    SL F+LAD G+DVW+ N RG  WS  H+ LS KS  +W +SW ++A YDL   +  I  K+  K +F VGHSQ                            TI  +A  T P++ + +     L+P++ + +  +P+
Sbjct:   35 SELISYWGYPYEKHDVITEDGYILGTYRIPHGKGCSRKTAPKAVVYLQHGLIASANNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRNHLRLSPKSPQYWAFSWDEMAKYDLPATVNLILEKSGQKQLFYVGHSQ--------------------------GTTIAFIAFSTNPELAKKIRLFFALAPVATVKYTRSPM 210          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIPK_HUMAN (Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.632e-23
Identity = 68/202 (33.66%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNL-RVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSK-IFLVGHSQVETFYLTIH*A*DPCISTYSFYLHSLQGTIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPL 737
            S +I   GYP  E+ V TKDGY+L + R+    G   R    P V L HGL      W  +    SL F+LAD G+DVW+ N RG  WS  H+ LS KS  +W +S  ++A YDL   I FI  KT  K ++ VGHSQ                            TI  +A  T P++ + ++    L+P+  + +  +P+
Sbjct:   36 SQIISYWGYPYEEYDVTTKDGYILGIYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQ--------------------------GTTIAFIAFSTNPELAKKIKIFFALAPVVTVKYTQSPM 211          
BLAST of FC877863 vs. ExPASy Swiss-Prot
Match: LIPN_HUMAN (Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.489e-23
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 3
Query:  138 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLV-HGLFMGGDAWFLDSTEESLGFILADHGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHS 542
            S +I  NGYP  E+ V T+DGY+L + R+     + R     PV+ + H LF     W  +    SLGF+LAD G+DVW+ N RG  WS  H TLSE  + FW +S+ ++A YDL  +I FI  KT   K++ +GHS
Sbjct:   37 SEIIIYNGYPSEEYEVTTEDGYILLVNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENYANGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTGQEKLYFIGHS 173          
The following BLAST results are available for this feature:
BLAST of FC877863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
LIP1_ARATH7.778e-8463.49Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIP2_ARATH7.887e-3632.27Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIPM_HUMAN3.321e-2633.33Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2[more]
LICH_MACFA8.180e-2534.15Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LICH_HUMAN1.822e-2433.33Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPM_MOUSE2.380e-2442.55Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1[more]
LIPN_MOUSE2.015e-2343.26Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1[more]
LIPK_MOUSE2.015e-2332.67Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1[more]
LIPK_HUMAN2.632e-2333.66Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2[more]
LIPN_HUMAN4.489e-2342.34Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60DA03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877863 ID=FC877863; Name=FC877863; organism=Citrus clementina; type=EST; length=845bp
ATATGATGAGGTCGCTGTCATCATCACTGGTGGTTGGCGCGATTTTCGCT
CTCCTCCTACGCGAAATCTCCGCCGTCAAAACCGATGTTTCGAATCTACG
CCGTCGATCACCGGACGATGGCACTCGCTCACTCTGCTCTCACCTCATCC
GGCCCAACGGCTATCCCTGCACCGAACACACCGTTCAAACAAAGGATGGT
TACTTACTGGCTCTTCAAAGAGTGTCATCTCGCAATGGGAATCTAAGAGT
TCAATGCGGTCCCCCTGTTTTGCTTGTGCATGGACTCTTCATGGGAGGTG
ATGCGTGGTTTTTGGATTCTACGGAAGAGTCATTGGGCTTCATCCTTGCA
GATCATGGTTTTGATGTATGGGTTGCAAATGTGCGCGGGACGCATTGGAG
TCATGGCCATGTAACTTTATCCGAGAAGAGTAAGGGCTTTTGGGATTGGA
GTTGGCAGGATTTGGCTCTGTATGACCTTGCTGAAATGATATGTTTCATA
AATTTGAAAACAAGCTCCAAAATTTTCCTTGTTGGACATTCACAGGTTGA
AACATTTTATTTGACAATTCACTAGGCATAAGATCCTTGCATCAGTACAT
ACTCGTTTTATTTGCATTCTTTGCAGGGAACCATCGTGTCTTTGGCTGCT
CTCACTCAGCCAGACGTAGTGGAAATGGTTGAGGCTGCTGCTCTTTTGAG
TCCTATATCATACTTGGATCATATCACTGCTCCACTTGTACGAAGAATGG
TTAGCATGCATCTTGATCAGATGGTTTTGGCTCTGGGTATACATCAACTG
AATTTTAGAAGTAATGTGTTAATTGACCTCATCGACTCCCTATGC
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