FC877873
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 7.370e-63 Identity = 138/275 (50.18%), Postives = 186/275 (67.64%), Query Frame = 2 Query: 35 TNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAA-------PFLMNAATGRRLTYPEFLRQTNSLTLSLQKHY-SLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPN---FRTVLVDSPEFLSLLSTQHQNDVVISPPAV-VNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFLALVRVVAV 823 TN + LID +SGF +T +HS+RP + LPP QPLS +F LS+L KS+ A +L+N+++G LTY E LR+ SL +SL++ + SL+ +VAFILSPSS +IPVLY +L+S+GVVVSPANP+GS SE+SHQ+ +S+P IAFATS+T KL + TVL+DS EFLS L+ + V +P V VNQSD A IL+SSGTTG+VKGVLLTHRN+I+ A H + P V L +LPLFHVFGF+ ++R +++ Sbjct: 5 TNDSRLIDRSSGFDQRTGIYHSLRPSLSLPPIDQPLSAAEFALSLLLKSSPPATAGKNIEALTYLVNSSSGDNLTYGELLRRVRSLAVSLRERFPSLASRNVAFILSPSSLDIPVLYLALMSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSSSLPLGTVLMDSTEFLSWLNRSDSSSV--NPFQVQVNQSDPAAILFSSGTTGRVKGVLLTHRNLIASTAVSHQ-----RTLQDPVNYDRVGLFSLPLFHVFGFMMMIRAISL 272
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.442e-50 Identity = 114/264 (43.18%), Postives = 162/264 (61.36%), Query Frame = 2 Query: 53 IDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNFRTVLVDSPEFLSLLSTQHQNDVVISPPAV-VNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHH------VEYGANPTEQPQPSGEVSLITLPLFHVFGFLALVRVVAV 823 ID SGFC+ T+ FHS R LPP S P++ + S+L S+T P L++AATG ++YP FL SL L L DVA +++PS E+PVL F+L+S+G VVSPANP+ + E +HQ+ LS+P +AFA + KLP + R V++ S E+ L ++ + +P AV V QSD A +LYSSGTTG+VK V +THRN+I+L+ S H A E+P P V+L+ +PLFHVFGF+ ++R V++ Sbjct: 15 IDSRSGFCAATRIFHSTRAPGDLPPESLPMTAAAYAFSLL-SSSTLPGRPALVDAATGIAISYPSFLAAVRSLAGGLWCSLGLRPGDVALVVAPSRLEVPVLDFALMSIGAVVSPANPVSTPEEYAHQVALSRPVVAFAAPEVAAKLPEHVRCVVIGSDEYGRLAASDGRR--AAAPAAVAVKQSDTAAVLYSSGTTGRVKAVAITHRNLIALM-SLHADNREKVAREAAEAGEEPPPPA-VTLLPIPLFHVFGFMMVLRSVSM 273
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.057e-49 Identity = 111/264 (42.05%), Postives = 163/264 (61.74%), Query Frame = 2 Query: 65 SGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAA------PFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNFRT-VLVDSPEFLSLL----STQHQNDVVISPPAVVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFLALVRVVAV 823 +G+C+ TK+F S+RP +PLPP PLS +F S+L +S++++++ P L++AATG +++ FL + +L +L+ L DVAF+L+P+ ++PVLYF+LLS+G VVSPANP + +E+S + LS S+AFA S T+ KLP T VL+DSP F SLL Q Q + P VV QS+ A I YSSGTTG+VK L HR+ I++VA FH + A +L+ P+FH GFL +++ VA+ Sbjct: 17 TGYCAATKSFRSLRPPVPLPPPDVPLSFPEFAFSLLPRSSSSSSSSLLPANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPVLYFALLSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSSTATKLPAGLTTVVLLDSPHFRSLLMDCGQAQGQEPL---PVVVVRQSETAAIQYSSGTTGRVKAAALPHRSFIAMVAGFHALRAKAREVR--------TLLGAPMFHSMGFLFVLQGVAL 269
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 3.006e-48 Identity = 104/267 (38.95%), Postives = 149/267 (55.81%), Query Frame = 2 Query: 65 SGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAA---PFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNFRTVLVDSPEFLSLLSTQHQNDVVISPPAVVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVE------------YGANPTEQPQPSGEVSLITLPLFHVFGFLALVRVVA 820 SGFC+ T+TFHS+R PLPP PL+V + S+L + A P L++AATG ++YP F+ + L L L DVA ++SPS ++ VLYF+L+S+GVVVSPANP + E +HQ+ LS+P+IAF + +LP + V++ S F L S P + Q A +LYSSGTTG+VK V +THRN+I+ +++++ + G P P P V+L LPLFHV GF L R ++ Sbjct: 42 SGFCAATRTFHSLRSVGPLPPEELPLTVAAYAFSLLSSAPPLVVAGRGPALVDAATGIAVSYPAFVARVRFLAGGLWCSLGLRPGDVALVVSPSCLDVAVLYFALMSIGVVVSPANPASTADEYAHQVRLSRPAIAFVAPEVAARLPRHVSRVVIGSEVFDRLASASAAGGWAAPPAVAMKQPSTAALLYSSGTTGRVKAVAITHRNLIAQISAYNAIRETVAREAATDAGKGKPPPPSPSPPAAVTLFPLPLFHVMGFGLLTRTIS 308
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 4.214e-34 Identity = 95/271 (35.06%), Postives = 138/271 (50.92%), Query Frame = 2 Query: 26 MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNFRTVLVDSPEFLSLLSTQHQNDVVISPPAV------------VNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFLA 802 MA + ++DP SGFC TF+S R + LPP+ L VT F S + T ++A+TG RLT+ + R + + L + + DV ILSP+S IPV+ S++SLG VV+ AN L ++ EIS Q+ S P++ F TS+ + KL VL D + + T V I + VNQ D A++LYSSGTTG KGV+ +HRN+ + VA + + E+ + T+P+FH FG LA Sbjct: 1 MAYPERDLIVDPRSGFCKSNSTFYSKRNPLCLPPNPS-LDVTTFISSQPQRGTTA-----FIDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLAPKLAAAISVVLTDEEDEKRVELTSGVRVVGILSEMMKKETSGQRVRDRVNQDDTAMMLYSSGTTGTSKGVISSHRNLTAYVAKY---------IDDKWKRDEIFVCTVPMFHSFGLLA 256
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.092e-33 Identity = 93/268 (34.70%), Postives = 138/268 (51.49%), Query Frame = 2 Query: 26 MAGTNSNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNFRTVLVDSPEFLSLLSTQH----QNDVVISPPA------VVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFL 799 MA + ++DP SGFC TF+S R + LPP+ VT F S H+ T ++AATG+ LT+ + R + + L + + DV ILSP+S IPV+ S++SLG V + AN L ++ EIS Q+ S P++ F T + + KLP VL D + L S +++V P+ VNQ D A++LYSSGTTG KGV+ +HRN+ + VA F ++ + T+P+FH +G L Sbjct: 1 MAYPERSLIVDPRSGFCKSNSTFYSKRQPLSLPPNLSR-DVTTFISSQPHRGKTA-----FIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQLAPKLPVAISVVLTDDEVYQELTSAIRVVGILSEMVKKEPSGQRVRDRVNQDDTAMMLYSSGTTGPSKGVISSHRNLTAHVARF---------ISDNLKRDDIFICTVPMFHTYGLL 253
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.038e-32 Identity = 98/266 (36.84%), Postives = 142/266 (53.38%), Query Frame = 2 Query: 53 IDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKH-YSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLP--PNFRTVLVDSPEFLS------LLSTQHQNDVVISPPA----VVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLV---ASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFLA 802 +D SG+C+ T+TF S R +PLP + + V F S H L++AATGRR+T+ E R +L H SL K VA ILSP+S PV + +SLG V++ ANPL + +EI+ Q+ ++P +AF T KLP + R VL++S +++T + PA V Q D A +LYSSGTTG KGV+ THR++IS+V + +E G++ T E L T+P+FHV+G +A Sbjct: 9 VDARSGYCAATRTFRSRRADVPLPADPE-VDVVSFLASRRHSGVVA-----LVDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVADARPVLAFTTRELLPKLPRAHDLRVVLLESARLPGDSSDPRIVATIEEISATTPDPARRKDRVTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIMTRFRLE-GSDKT-------ETFLCTVPMFHVYGLVA 260
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.771e-32 Identity = 88/267 (32.96%), Postives = 143/267 (53.56%), Query Frame = 2 Query: 41 SNGLIDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKLPPNFRTVLVDSPEFL-----SLLSTQHQNDVVISPPA------VVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFLALV 808 S+ LIDP +GFC+ TF+S R + LP S + L +T F S ++ T ++AAT R+++ + + + L + + DV +LSP++ IP++ S++SLG V++ ANPL + SEI Q+ S P +AF T + K+ + +++++ E L + +++ P+ V++ D A++LYSSGTTG+ KGV +H N+I+ H Y A P EQPQ + + T+PLFH FG L V Sbjct: 7 SSSLIDPRNGFCTSNSTFYSKRKPLALP-SKESLDITTFISSQTYRGKTA-----FIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLGAVLTTANPLNTASEILRQIADSNPKLAFTTPELAPKIASSGISIVLERVEDTLRVPRGLKVVGNLTEMMKKEPSGQAVRNQVHKDDTAMLLYSSGTTGRSKGVNSSHGNLIA-----HVARYIAEPFEQPQ---QTFICTVPLFHTFGLLNFV 259
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.339e-31 Identity = 87/259 (33.59%), Postives = 141/259 (54.44%), Query Frame = 2 Query: 53 IDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKL---PPNFRTVLVDSPEFLSLLSTQHQNDVVISPPA------VVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGFLA 802 ++ SGFC+ TF+S R IPLPP+ L VT F S H+ ++A+TG+ LT+ E R S+ L + + K V +LSP+S PV+ S++SLG +++ NPL +++EI+ Q+ S P +AF TS+ K+ VL+D S+ + +++ P+ V+Q D A +LYSSGTTG KGV+ +HRN+I++V + + +G++ EQ + T+P+FH++G A Sbjct: 4 VNSRSGFCNSNSTFYSKRTPIPLPPNPS-LDVTTFISSQAHRGRIA-----FIDASTGQNLTFTELWRAVESVADCLSE-IGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDSVGDVRRLVEMMKKEPSGNRVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQTIVN-RFGSDDGEQR------FICTVPMFHIYGLAA 248
BLAST of FC877873 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.339e-31 Identity = 92/264 (34.85%), Postives = 138/264 (52.27%), Query Frame = 2 Query: 53 IDPNSGFCSQTKTFHSVRPKIPLPPSSQPLSVTQFTLSILHKSATTTAAPFLMNAATGRRLTYPEFLRQTNSLTLSLQKHYSLSKNDVAFILSPSSFEIPVLYFSLLSLGVVVSPANPLGSTSEISHQLHLSKPSIAFATSRTSHKL--PPNFRTVLV-------------DSPEFLSLLSTQHQNDVVIS-PPAVVNQSDAAVILYSSGTTGKVKGVLLTHRNIISLVASFHHVEYGANPTEQPQPSGEVSLITLPLFHVFGF 796 +D SGFC T F+S R + LPP+ Q L VT F S H+ T ++A TGRRL++PE + L + K +V ILSP+S P++ S++SLG +++ ANP+ ++ EIS Q+ S+P +AF T + KL NF +V D + + L T + + S VNQ D A +LYSSGTTG KGV+L+HRN+I+LV ++ +G + ++ T+P+ H+FGF Sbjct: 21 VDRKSGFCESTSIFYSKREPMALPPN-QFLDVTSFIASQPHRGKTV-----FVDAVTGRRLSFPELWLGVERVAGCLYA-LGVRKGNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPSQSYGDRVKLVGRLETMIETEPSESRVKQRVNQDDTAALLYSSGTTGTSKGVMLSHRNLIALVQAY-RARFGLE---------QRTICTIPMCHIFGF 267 The following BLAST results are available for this feature:
BLAST of FC877873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877873 ID=FC877873; Name=FC877873; organism=Citrus clementina; type=EST; length=826bpback to top |