FC877907

Overview
NameFC877907
Unique NameFC877907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length903
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10481 contig Ccv1_Contig10481:6..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_HUMAN (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.986e-55
Identity = 113/252 (44.84%), Postives = 163/252 (64.68%), Query Frame = 1
Query:  169 MAKTKEKKVNVSGKPKHSLDANRTDGKSGS--RSASTVRRLNMYKTRPKRDRKGKVLQH-EFQSKELPNT--RIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQK--QARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            M K K K  +     K S + +R  G  G   R  +T+RRLNMY+ + +R+ +GK+++  ++QS     T  R++P+ +WFGNTR + Q  L+ F+EE+ + M   Y V++++ KLP SLL+D  +    +VH+LDTE F+  FGPK +RKRP L ASD +SL++ A+ S ++++Q  D     E     G R+  +  +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR  H+E +LK+    KH
Sbjct:    1 MVKPKYKGRSTINPSKASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDT---GVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKH 249          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_MOUSE (Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 114/252 (45.24%), Postives = 163/252 (64.68%), Query Frame = 1
Query:  169 MAKTKEKKVNVSGKPKHSLDANRTDGKSGS--RSASTVRRLNMYKTRPKRDRKGKVLQH-EFQSKELPNT--RIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQK--QARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            M K K K  +   +   S + +R  G  G   R   T+RRLNMY+ + +R+ +GKV++  ++QS     T  R++P+ +WFGNTR + Q  L+ F+EE+   M   Y V++++ KLP SLL+D  +   A+VH+LDTE F+  FGPK +RKRP L ASD +SL++ A+ S ++++Q  D       +E  G R+  +  +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR  H+E +LK+    KH
Sbjct:    1 MVKPKYKGRSTINRSAASTNPDRVQGAGGQNMRDRGTIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTESFESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLV---MEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKH 249          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_SCHPO (Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe GN=nog2 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.228e-53
Identity = 109/245 (44.49%), Postives = 153/245 (62.45%), Query Frame = 1
Query:  175 KTKEKKVNVSGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            K ++ ++   G  +      R  G++  R+A  V R+NMY+  + K +  G++++  EFQS E+P  RIQPDRRWF NTR + Q  L  FRE +   ++  Y V+LR  KLP SLL ++ +  +V +L++EPF++ FGPK +RKRPK+       L K +D  Q+A+E+K +    A   E D      R  +F KGQSKRIW ELYKVIDSSDV++QVLDARDP GTRC  +ER+L+    HKH
Sbjct:    5 KKEKSRIGREGANEKKPGNLRVKGENFYRNAKDVARVNMYRGGKAKYNAAGELVRAAEFQSSEVPKARIQPDRRWFNNTRVIAQPTLTQFREAMGQKLNDPYQVLLRRNKLPMSLLQENTEIPKVRVLESEPFENTFGPKSQRKRPKISFDSVAELAKESDEKQNAYEEKIEERILANPDESDDVMLAARDAIFSKGQSKRIWNELYKVIDSSDVLIQVLDARDPVGTRCGTVERYLRNEASHKH 249          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_YARLI (Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica GN=NOG2 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.095e-53
Identity = 109/225 (48.44%), Postives = 145/225 (64.44%), Query Frame = 1
Query:  235 RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            R  G +  R A  V++L+MYK  R K + +G+ +Q   FQSKE+PN RI P+RRWFGNTR + Q  L  FRE L      SY V+LR+ KLP SLL ++ K  +V +++TE + + FGPK +RK+P+L   D+  L   AD SQ  FE K +   S    + DG+    +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E+++K+   HKH
Sbjct:   25 RVKGVNFYRDAKKVKKLSMYKEGRAKHNARGEEVQAATFQSKEIPNARIDPNRRWFGNTRVIAQDALNHFREALGETKRDSYQVLLRQNKLPMSLLEENNKIPQVKVVETESYANTFGPKAQRKKPQLAVGDFAELASAADESQQDFEAKKEEDNS---WKVDGWSQEAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCTSVEQYIKKEAPHKH 246          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_YEAST (Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae GN=NOG2 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.705e-51
Identity = 107/232 (46.12%), Postives = 146/232 (62.93%), Query Frame = 1
Query:  235 RTDGKSGSRSASTVRRLNMYKTRPK-RDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKN--DASTSAEGVEGD---GFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            R  G++  R +  V+ LNMY +  + R++KG +++   FQ   +P+ R+QPDRRWFGNTR ++Q  L+ FR  L      +Y V+LR  KLP SLL   D  +  +  +LDTE + DAFGPK +RKRP+L AS+ E LVK  +     +E+K   DA+    G + D   G+    +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E ++K+   HKH
Sbjct:   23 RVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAASFQDSTIPDARVQPDRRWFGNTRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTESYADAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKH 254          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_ASHGO (Nucleolar GTP-binding protein 2 OS=Ashbya gossypii GN=NOG2 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.831e-50
Identity = 108/253 (42.69%), Postives = 153/253 (60.47%), Query Frame = 1
Query:  172 AKTKEKKVNVSGKPKHSLDAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            AK ++++    G  K   D N R  G++  R    V+ LNMYK  +  R+ KG +++    QS ++P  R+QPDRRWFGNTR ++Q  L+ FR+ L    + SY V+LR  KLP SLL   D  +     ++DTEP+   FGPK +RK+P++ A+  E L K  D     +E+K +  ++    A   + DG+  + +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E ++K+   HKH
Sbjct:    4 AKKEQQRRIREGNTK---DGNLRVKGENFYRDGKRVKFLNMYKGGKSIRNAKGDLIRAAPLQSTDVPTARVQPDRRWFGNTRVISQDALQHFRDALGDKKNDSYQVLLRRNKLPMSLLEEKDTSESPTAKIIDTEPYGATFGPKAQRKKPRVAAASLEDLAKATDSDSQKYEEKKELDSTLGLMAATEQEDGWSQVAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKH 253          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_CANGA (Nucleolar GTP-binding protein 2 OS=Candida glabrata GN=NOG2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.397e-49
Identity = 105/253 (41.50%), Postives = 156/253 (61.66%), Query Frame = 1
Query:  175 KTKEKKVNVSGKPKHSLDAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSA-----EGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            K K++++   G  K   D N R  G++  R +  V+ LNMYK+ +  +++ G V++  ++Q   +P+ R+QPDRRWFGNTR ++Q  L+ FR+ L      +Y V+LR  KLP SLL+  D  +  R  +L+TE F   FGPK +RK+P++ AS  E LV+  +     +E+K +   +      +  E +G+  + +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +E ++K+   HKH
Sbjct:    6 KEKQRRIR-EGTTK---DGNIRVKGENFYRDSKRVQFLNMYKSGKAIKNKHGDVIRAADYQDTTIPDARVQPDRRWFGNTRVISQDALQHFRDALGETQKDTYQVLLRRNKLPMSLLDEKDSTESPRARILETESFDQTFGPKAQRKKPRVAASSLEELVQATEEENKTYEEKEELKATLGLMGKQEDEENGWTQVTKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKH 254          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_KLULA (Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis GN=NOG2 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.108e-49
Identity = 107/250 (42.80%), Postives = 145/250 (58.00%), Query Frame = 1
Query:  181 KEKKVNVSGKPKHSLDAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            KEK+  +  +  ++ D N R  G++  R    V+ LNMYK  R  R+ KG +++    Q    P  R+ PDRRWFGNTR ++Q  L  FRE L  +   SY V+LR  KLP SLLN  D  +     +L+TEPF+  FGPK +RK+P++ AS  E L+         FE+K +  ++     +  E DG+    +  +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC  +  ++     HKH
Sbjct:    6 KEKQRRI--REGNTKDGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDTAAPTARVAPDRRWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFEQTFGPKAQRKKPRIAASSLEELISSTSTDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKH 253          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_PNECA (Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.217e-46
Identity = 98/217 (45.16%), Postives = 135/217 (62.21%), Query Frame = 1
Query:  259 RSASTVRRLNMYKT-RPKRDRKGKVL-QHEFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            R A  VR +N+ K+ + KR++ GK++ Q EFQSK++ + RIQP RRWF NTR ++Q  L  FRE     ++    V+L++ KLP SLL +  K  + +++D EPF D FG K  RKR KL AS  E+L   A  S + + +KN    + +      F       +F KG SKRIW ELYK IDSSDV++Q+LDAR+P GTRC H+E +LK+   HKH
Sbjct:   20 RDAKKVRWINLLKSGKAKRNKSGKIIKQGEFQSKDVQDARIQPYRRWFSNTRVISQDVLNMFRESFAEKLNDPCKVLLKQNKLPMSLLMEPTKTRKANIIDIEPFDDTFGKKSXRKRAKLYASSIENLSNFAFESYENYIKKNSEYENVDKNIQKSF-----EAIFSKGTSKRIWNELYKXIDSSDVIIQLLDARNPLGTRCKHVEEYLKKEKPHKH 231          
BLAST of FC877907 vs. ExPASy Swiss-Prot
Match: NOG2_NEUCR (Nucleolar GTP-binding protein 2 OS=Neurospora crassa GN=nog-2 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.822e-44
Identity = 100/260 (38.46%), Postives = 149/260 (57.31%), Query Frame = 1
Query:  184 EKKVNVSGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA-RVH----LLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEG--DGFRD-----------LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPSGTRCHHLERHLKEHCKHKH 903
            +++  V+G PK         G++  RSA  ++ LN+ K  +  R+++GKV++   +QS+++P   I+P+RRWF NTR ++Q  L  FRE +       Y+V+L+  KLP SL+ D  K A + H     +++EPF   FGPK +RKRPKL  +    L + ++ S D ++ + +      G  G   G  D             +  +F KGQSKRIW ELYKVIDSSDV++ V+DARDP GTRC H+E++L     HKH
Sbjct:   12 QRQGKVTGDPK-------VKGENFYRSAKKIKALNVLKEGKAIRNKEGKVVKAASYQSRDVPTAVIEPNRRWFNNTRVISQDTLTSFREAIAEKDKDPYSVLLKSNKLPMSLIRDGPKDALKKHQAKMTIESEPFSQTFGPKAQRKRPKLSFNTIGDLTEHSEKSMDTYQARLEEIKLLSGASGYGGGLADDDVQEEDFSVATAKEAIFTKGQSKRIWNELYKVIDSSDVILHVIDARDPLGTRCRHVEKYLATEAPHKH 264          
The following BLAST results are available for this feature:
BLAST of FC877907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NOG2_HUMAN4.986e-5544.84Nucleolar GTP-binding protein 2 OS=Homo sapiens GN... [more]
NOG2_MOUSE8.505e-5545.24Nucleolar GTP-binding protein 2 OS=Mus musculus GN... [more]
NOG2_SCHPO1.228e-5344.49Nucleolar GTP-binding protein 2 OS=Schizosaccharom... [more]
NOG2_YARLI2.095e-5348.44Nucleolar GTP-binding protein 2 OS=Yarrowia lipoly... [more]
NOG2_YEAST5.705e-5146.12Nucleolar GTP-binding protein 2 OS=Saccharomyces c... [more]
NOG2_ASHGO2.831e-5042.69Nucleolar GTP-binding protein 2 OS=Ashbya gossypii... [more]
NOG2_CANGA2.397e-4941.50Nucleolar GTP-binding protein 2 OS=Candida glabrat... [more]
NOG2_KLULA9.108e-4942.80Nucleolar GTP-binding protein 2 OS=Kluyveromyces l... [more]
NOG2_PNECA7.217e-4645.16Nucleolar GTP-binding protein 2 OS=Pneumocystis ca... [more]
NOG2_NEUCR8.822e-4438.46Nucleolar GTP-binding protein 2 OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA49BE09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA49BE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877907 ID=FC877907; Name=FC877907; organism=Citrus clementina; type=EST; length=903bp
AAAATGAAAAACCCTAGCCCCAAATTAGCAAAGCAAGCCGCCCACTTCTG
CAAACTCAGAACTCAAGTTGGCGCCACCCTTACATCAAGAGCTGAAAGCC
GCAATTTACTCAGCCTTCCGTCATCCTCCTTACAGGAATTCGTCGCCTTT
ACTCACCGGTGAACGAAAATGGCAAAGACGAAAGAGAAGAAAGTGAATGT
GTCGGGCAAGCCGAAACACTCGCTGGACGCGAATCGTACGGACGGGAAAA
GCGGTAGCCGAAGTGCGTCGACAGTACGCCGCCTCAATATGTACAAGACG
AGGCCGAAACGCGACCGTAAGGGCAAAGTTTTGCAGCACGAGTTTCAGTC
GAAGGAGTTGCCCAACACTCGCATTCAGCCAGACCGCCGCTGGTTCGGGA
ACACACGTTGTGTGAATCAGAAGCAGCTCGAGTTCTTTCGTGAAGAGCTA
CAGAGCCATATGTCTAGTAGCTATAATGTTATCTTGAGAGAGAAAAAACT
GCCCTTTTCTCTCCTAAATGATCACCAGAAGCAAGCTAGAGTTCACCTCC
TTGATACCGAGCCTTTTCAAGATGCCTTTGGACCTAAGGGAAAGAGGAAG
AGGCCAAAGTTATTGGCATCAGATTACGAATCTTTAGTTAAGAGAGCTGA
TGGTTCTCAAGATGCCTTTGAGCAGAAGAATGATGCTAGTACATCAGCAG
AAGGAGTTGAGGGAGATGGATTTAGGGATCTTGTTCGGCATACAATGTTT
GAGAAGGGTCAAAGTAAACGTATATGGGGAGAACTGTACAAAGTAATAGA
CTCGTCGGATGTTGTTGTCCAGGTTTTGGATGCTAGAGACCCCTCAGGCA
CAAGATGTCATCATCTTGAGAGGCATCTAAAAGAGCATTGCAAACATAAG
CAC
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