FC877930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RBP9X_DROME (Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster GN=RanBPM PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.471e-34 Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 238 VSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFD-----LKEYEAQERMKQQMTIEKISLPPNVSYGLVRSYLQH 819 +S + L V Y V D V+ P P +YYFE+ + G G + IG T++ F+M R PGW+ S GYHGDDG + G G+ +GPTFTT D +G +N+ + F+TKNG +G ++D+ L+PT+ + + EEV NFGQ+ F FD +KE + K + P N+ LV +YL H Sbjct: 433 LSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRDLPTKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRYPHLLETPENLMNRLVSTYLVH 631
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RBP10_MOUSE (Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.388e-34 Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLPPN------VSYGLVRSYLQHYG 825 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD+++Y + R K Q T+ + V +V SYL H+G Sbjct: 93 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHGFPISARLGEWQAVLQNMVSSYLVHHG 297
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RBP10_HUMAN (Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.226e-33 Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLPPN------VSYGLVRSYLQHYG 825 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD+++Y + R K Q T+ + V +V SYL H+G Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHG 269
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RBP10_DANRE (Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.226e-33 Identity = 71/205 (34.63%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLPPN------VSYGLVRSYLQHYG 825 ++ +S + L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD+++Y ++ R K I + + V +V SYL H+G Sbjct: 53 YIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGVAFTDLPPNLYPTVGLQTPGEIVDANFGQQPFVFDIEDYMSEWRAKIHSMIARFPIGERLGDWQAVLQNMVSSYLVHHG 257
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RBP10_BOVIN (Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.226e-33 Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLPPN------VSYGLVRSYLQHYG 825 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD+++Y + R K Q T+ + V +V SYL H+G Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHG 269
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RANB9_MOUSE (Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.568e-33 Identity = 71/205 (34.63%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLP------PNVSYGLVRSYLQHYG 825 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD+++Y + R K Q I++ + + +V SYL H+G Sbjct: 102 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHG 306
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RANB9_HUMAN (Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.568e-33 Identity = 71/205 (34.63%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLP------PNVSYGLVRSYLQHYG 825 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD+++Y + R K Q I++ + + +V SYL H+G Sbjct: 177 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHG 381
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RANB9_XENLA (Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.038e-32 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLP---PNVSYGLVRSYLQHYG 825 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD+++Y + R K Q IE+ + ++ +V SYL H+G Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQSPFVFDIEDYIREWRSKIQAQIERFPVAGEWQSMIQRMVSSYLVHHG 233
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RANB9_XENTR (Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.771e-32 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLP---PNVSYGLVRSYLQHYG 825 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD+++Y + R K Q IE+ + ++ +V SYL H+G Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQSPFVFDIEDYIREWRTKIQAQIERFPVGGEWQSMIQRMVSSYLVHHG 233
BLAST of FC877930 vs. ExPASy Swiss-Prot
Match: RANB9_DANRE (Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.771e-32 Identity = 71/204 (34.80%), Postives = 108/204 (52.94%), Query Frame = 1 Query: 229 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKEYEAQERMKQQMTIEKISLPPN------VSYGLVRSYLQHY 822 ++ +S + L V Y D V+A P P VYYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD+++Y + R K Q I++ + + +V SYL H+ Sbjct: 59 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQSQIDRFPIGEREGEWQAMIQKMVASYLVHH 262 The following BLAST results are available for this feature:
BLAST of FC877930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877930 ID=FC877930; Name=FC877930; organism=Citrus clementina; type=EST; length=825bpback to top |