FC877933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877933 vs. ExPASy Swiss-Prot
Match: Y1998_PARUW (Uncharacterized RNA methyltransferase pc1998 OS=Protochlamydia amoebophila (strain UWE25) GN=pc1998 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.522e-39 Identity = 85/224 (37.95%), Postives = 122/224 (54.46%), Query Frame = 3 Query: 180 ALQCPHFQSCSGCTHEFNLHRPIIVDEATDFFKSIGLLDFTFDSCRLYGWRCRAKLAVRGTSTSPLIGLYQEGTHNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLAP 851 AL CPHF SC+GC+H+ + PI + +F +++ + L GWRCRAKLAVRGT +P+IGL+++G+H ++IP C HHPRIN AV +++ ++ + PY E + GDLRY+Q V ER +GKVQI V N ++ SP S L L + + HS+W NF N IF ++W + GE WE+ G+ I P Sbjct: 9 ALSCPHFDSCAGCSHQLFVEPPIWREVIENFKETLNPI---LHQGTLTGWRCRAKLAVRGTKQNPIIGLFKKGSHEALNIPFCLVHHPRINQAVTMIQNWMERHQLNPYQEHSQAGDLRYLQFVV----------ER-ASGKVQIVFVLNFKDFSSPESQIWRKLLLEL----AQETTNAFWHSIWVNFNPHATNTIFTDKWEKVWGEPYLWESFDGVKICFQP 214
BLAST of FC877933 vs. ExPASy Swiss-Prot
Match: Y1452_GEOSL (Uncharacterized RNA methyltransferase GSU1452 OS=Geobacter sulfurreducens GN=GSU1452 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13 Identity = 63/230 (27.39%), Postives = 100/230 (43.48%), Query Frame = 3 Query: 189 CPHFQSCSGCTHEFNLHRPIIVDEATDF-------FKSIGLLDF--TFDSCRLYGWRCRAKLAVRGTSTSPLIGLYQEGTHNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLAP 851 C SC GC +H P ++ F ++++G + T S +R AKL V GT P+IG+Y+ +H V+DI C HHP IN V +++GI + V+ Y+ +G LRY+ + ++ R G V R N +++ LA+ L + + V N +S NVI G R L + E +GGI +++P Sbjct: 88 CKRAGSCDGCPL-IVMHYPDQLNWKRTFTERQIRRYQTLGAAEVLATLPSPNQLHYRNSAKLVVSGTFRRPVIGIYRRNSHQVMDIGTCPLHHPLINRVVTAVKEGIAKCKVQVYNPRTGSGLLRYLVVRISE-----------RTGTAMAVFVTVER-----NYNEIHHLAKHL------QQSVPQVEVVVQNVNSSEGNVILGQRDYFLTRQHALTEELGGIRFTISP 294
BLAST of FC877933 vs. ExPASy Swiss-Prot
Match: Y542_BACC1 (Uncharacterized RNA methyltransferase BCE_0542 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_0542 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12 Identity = 56/230 (24.35%), Postives = 107/230 (46.52%), Query Frame = 3 Query: 189 CPHFQSCSGCT-------HEFNLHRPIIVDEATDFFKSIGLLDF---TFDSCRLYGWRCRAKLAVRGTSTSPLIGLYQEGTHNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLA 848 CP ++ C GC + N R I+V +A + + GL + T + +R +++L V + GLY++ +H ++DI HC H N A +++R+ +++LNV Y+E + G +R ++ + G+VQ+TL+ + E+ PN ++ +AE + + + S+ N +VIFG++ L G+ E +G + L+ Sbjct: 80 CPVYEECGGCQLQHLDYKEQLNQKRDIVV-QAFQKYMNNGLEEKIRPTLGMENPWHYRNKSQLQVGRKDEKVITGLYKQNSHQLIDIAHCMIQHKATNEATKVVRRILEKLNVSIYNEKKQKGLVR-----------TIVTRTAVQTGEVQVTLI--TTKEELPNKEQF--IAEV-------QKQMPAVKSIMQNVNWRKTSVIFGDKTFKLAGKEVIQETLGDLSFELS 286
BLAST of FC877933 vs. ExPASy Swiss-Prot
Match: Y426_BACAN (Uncharacterized RNA methyltransferase BA_0426/GBAA_0426/BAS0414 OS=Bacillus anthracis GN=BA_0426 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12 Identity = 54/229 (23.58%), Postives = 104/229 (45.41%), Query Frame = 3 Query: 189 CPHFQSCSGCT-------HEFNLHRPIIVDEATDFFKSI--GLLDFTFDSCRLYGWRCRAKLAVRGTSTSPLIGLYQEGTHNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLA 848 CP ++ C GC + N R I+V + K+ + T + +R +++L V + GLY++ +H ++DI HC H N A +++R+ +++LNV Y+E + G +R ++ + G+VQ+TL+ + E+ PN ++ +AE + + + S+ N +VIFG++ L G+ E +G + L+ Sbjct: 80 CPVYEECGGCQLQHLDYKEQLNQKRDIVVQAFEKYMKNSMEEKIRPTLGMENPWHYRNKSQLQVGRKDEKVITGLYKQNSHQLIDIAHCMIQHKATNEATKVVRRILEKLNVSIYNEKKQKGLVR-----------TIVTRTAVQTGEVQVTLI--TTKEELPNKEQF--IAEV-------QKQMPAVKSIMQNVNWRKTSVIFGDKTFKLAGKEVIQETLGDLSFELS 286
BLAST of FC877933 vs. ExPASy Swiss-Prot
Match: YFJO_BACSU (Uncharacterized RNA methyltransferase yfjO OS=Bacillus subtilis GN=yfjO PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 54/231 (23.38%), Postives = 100/231 (43.29%), Query Frame = 3 Query: 189 CPHFQSCSGC-------THEFNLHRPIIV---DEATDFFKSIGLLDFTFDSCRLYGWRCRAKLAV-RGTSTSPLIGLYQEGTHNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLA 848 CP ++ C GC + + R I++ + T F + T + +R +++ + R S S + GLY +H++V I C HP N ++R+ +++ NV Y+E R GD+R + V + G+VQ+ LV + E P+ +++ + R + S+ N + +VIFG + + L G+T E +G + L+ Sbjct: 82 CPVYEQCGGCQLQHLAYSQQLREKRDIVIQSLERHTKFKVENMEIKETIGMDNPWNYRNKSQFQIGRSQSGSIIAGLYGLDSHDIVPIKDCIVQHPATNKTTGIVRRILEDFNVSVYNERKRKGDVRTIVTRV-----------GFETGEVQVVLV--TAKETLPHKEEIVKAIQ---------KRLPEVKSIIQNVNGAKTSVIFGEKTKQLAGKTVIQEVLGDVSFELS 290 The following BLAST results are available for this feature:
BLAST of FC877933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877933 ID=FC877933; Name=FC877933; organism=Citrus clementina; type=EST; length=851bpback to top |